|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA656271 (2dpf) |
embryo |
baseline |
2dpf, FACS-isolated EGFP+ cells |
NA |
NA |
NA |
|
GSE158142 (5dpf) |
brain, eye |
baseline |
5dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (8dpf) |
brain, eye |
baseline |
8dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (15dpf) |
brain, eye |
baseline |
15dpf, untreatment |
NA |
NA |
NA |
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
GSE158142 (18hpf) |
head |
baseline |
18hpf, 18 somites, untreatment |
NA |
NA |
NA |
|
GSE158142 (20hpf) |
head |
baseline |
20hpf, 21-22 somites, untreatment |
NA |
NA |
NA |
|
GSE158142 (24hpf) |
head |
baseline |
24hpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (1.5dpf) |
head |
baseline |
1.5dpf, untreatment |
NA |
NA |
NA |
|
GSE158142 (3dpf) |
head |
baseline |
3dpf, untreatment |
NA |
NA |
NA |
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
NA |
NA |
NA |
|
GSE150498 (nod2-|-, 1X DSS) |
intestine |
disease |
6dpf, nod2-/-, 1X DSS |
NA |
NA |
NA |
|
GSE175929 (5mpf) |
retina |
baseline |
5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
NA |
NA |
NA |
|
GSE122680 (1.5dpf) |
retina |
baseline |
1.5dpf, WT, untreatment |
NA |
NA |
NA |
|
PRJNA672101 (nrl-KO) |
retina |
growth |
5mpf, three retinas from nrl-KO zebrafsih |
NA |
NA |
NA |
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
2.5dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
2.5dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
6dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
6dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
10dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |