Fish Single-cell RNA Database

GENE ID: ENSDARG00000094173

Symbol	Location	Gene type	Genome version	Species
BX927282.1	5: 27039024 ~ 27047864 (-)	processed_transcript	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	Floor plate (cluster: 17)	potential marker	NA
	GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
	GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
	GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
	GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
	GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
	GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
	GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
	GSE158142 (24hpf)	head	baseline	24hpf, untreatment
	GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
	GSE158142 (3dpf)	head	baseline	3dpf, untreatment
	GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
	GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
	GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells

After clicking the magnifying glass button, the clustering and expression information will be displayed below.