Fish Single-cell RNA Database

GENE ID: ENSDARG00000078975

Symbol	Location	Gene type	Genome version	Species
igl1c3	3: 58833306 ~ 58835177 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000078975 (igl1c3), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000091970	ms4a17a.3	4: 76722754 ~ 76728540 (+)
ENSDARG00000007018	ms4a17a.6	4: 76735113 ~ 76742479 (+)
ENSDARG00000095695	ms4a17a.10	4: 76745015 ~ 76751266 (+)
ENSDARG00000053563	ms4a17a.12	4: 76755294 ~ 76774721 (+)
ENSDARG00000034173	prkcq	4: 25410293 ~ 25441127 (+)
ENSDARG00000043802	ms4a17a.8	4: 76637548 ~ 76655373 (+)
ENSDARG00000093987	si:ch211-165f21.7	7: 5833060 ~ 5864185 (-)
ENSDARG00000093512	si:dkey-238j22.1	5: 33488860 ~ 33491935 (+)
ENSDARG00000094643	ms4a17c.1	5: 33519943 ~ 33525677 (+)
ENSDARG00000102230	si:ch211-8c17.3	3: 12835370 ~ 12837643 (+)
ENSDARG00000006468	grap2a	3: 29445473 ~ 29468859 (+)
ENSDARG00000078975	igl1c3	3: 58833306 ~ 58835177 (+)
ENSDARG00000103678	si:ch211-215e19.4	2: 51273795 ~ 51275873 (-)
ENSDARG00000100258	si:dkeyp-104b3.2	2: 51451103 ~ 51454868 (-)
ENSDARG00000098965	si:ch211-9d9.7	2: 51592392 ~ 51593835 (-)
ENSDARG00000074334	si:dkey-1c7.1	1: 57724157 ~ 57763348 (+)
ENSDARG00000088556	si:dkey-1c7.2	1: 57774454 ~ 57779848 (+)
ENSDARG00000096933	si:ch211-135n15.2	16: 42772678 ~ 42781773 (+)
ENSDARG00000089399	tmem176l.2	16: 46639772 ~ 46645396 (-)
ENSDARG00000017565	itk	14: 34045284 ~ 34074510 (-)
ENSDARG00000045089	si:ch211-270n8.1	13: 20379392 ~ 20381485 (-)
ENSDARG00000015065	c4	15: 32351886 ~ 32383529 (-)
ENSDARG00000020548	si:dkey-77f5.10	15: 934660 ~ 941773 (+)
ENSDARG00000015068	txk	23: 44049509 ~ 44060455 (+)
ENSDARG00000098477	tec	23: 44124138 ~ 44146690 (+)
ENSDARG00000005616	bfb	21: 27437867 ~ 27443995 (-)
ENSDARG00000044612	c1qb	21: 22712307 ~ 22715297 (-)
ENSDARG00000055278	cfb	21: 27416284 ~ 27431397 (+)
ENSDARG00000110046	igl3v1	24: 38205798 ~ 38206291 (+)
ENSDARG00000097702	si:ch1073-66l23.1	24: 38522254 ~ 38528645 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	NA	NA	NA
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000078975

EXPRESSION

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