Fish Single-cell RNA Database

GENE ID: ENSDARG00000097702

Symbol	Location	Gene type	Genome version	Species
si:ch1073-66l23.1	24: 38522254 ~ 38528645 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000097702 (si:ch1073-66l23.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000043796	ms4a17a.7	4: 76705830 ~ 76718322 (+)
ENSDARG00000091970	ms4a17a.3	4: 76722754 ~ 76728540 (+)
ENSDARG00000007018	ms4a17a.6	4: 76735113 ~ 76742479 (+)
ENSDARG00000095695	ms4a17a.10	4: 76745015 ~ 76751266 (+)
ENSDARG00000053563	ms4a17a.12	4: 76755294 ~ 76774721 (+)
ENSDARG00000014024	ms4a17a.4	4: 76752707 ~ 76762432 (+)
ENSDARG00000093546	si:ch73-56d11.5	4: 76775837 ~ 76785895 (+)
ENSDARG00000043802	ms4a17a.8	4: 76637548 ~ 76655373 (+)
ENSDARG00000094809	ms4a17a.11	4: 76575585 ~ 76588333 (+)
ENSDARG00000096874	tmem176l.3b	7: 66565572 ~ 66576522 (+)
ENSDARG00000100389	nitr11a	7: 17295053 ~ 17297156 (-)
ENSDARG00000093512	si:dkey-238j22.1	5: 33488860 ~ 33491935 (+)
ENSDARG00000028659	ms4a17c.2	5: 33498253 ~ 33500331 (+)
ENSDARG00000092593	si:dkey-174k12.3	5: 33503108 ~ 33504967 (+)
ENSDARG00000094643	ms4a17c.1	5: 33519943 ~ 33525677 (+)
ENSDARG00000078975	igl1c3	3: 58833306 ~ 58835177 (+)
ENSDARG00000093689	FP016018.1	3: 58656312 ~ 58656994 (+)
ENSDARG00000075962	vav3b	2: 15993389 ~ 16159491 (-)
ENSDARG00000087496	tradv30.0.6	2: 36597322 ~ 36597793 (-)
ENSDARG00000078659	tmem176	1: 44935442 ~ 44940953 (-)
ENSDARG00000096933	si:ch211-135n15.2	16: 42772678 ~ 42781773 (+)
ENSDARG00000098387	tmem176l.3a	16: 46596206 ~ 46619967 (-)
ENSDARG00000089399	tmem176l.2	16: 46639772 ~ 46645396 (-)
ENSDARG00000020548	si:dkey-77f5.10	15: 934660 ~ 941773 (+)
ENSDARG00000093855	igl3v2	24: 38201089 ~ 38201564 (+)
ENSDARG00000097702	si:ch1073-66l23.1	24: 38522254 ~ 38528645 (+)
ENSDARG00000079843	igl4v8	25: 37289088 ~ 37317174 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000097702

EXPRESSION

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