Fish Single-cell RNA Database

GENE ID: ENSDARG00000092813

Symbol	Location	Gene type	Genome version	Species
fndc7rs4	2: 45643122 ~ 45652375 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000092813 (fndc7rs4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000057714	cmah	4: 2228754 ~ 2250264 (+)
ENSDARG00000104431	slc1a3a	5: 8111350 ~ 8171625 (-)
ENSDARG00000115545	clec19a	3: 31177972 ~ 31188131 (+)
ENSDARG00000052027	tspan1	6: 33104544 ~ 33129312 (-)
ENSDARG00000092813	fndc7rs4	2: 45643122 ~ 45652375 (+)
ENSDARG00000034007	prom1b	1: 22712931 ~ 22757145 (-)
ENSDARG00000007697	fabp7a	17: 15433518 ~ 15435887 (+)
ENSDARG00000039966	prom1a	14: 46456091 ~ 46617228 (-)
ENSDARG00000089368	hopx	14: 1170968 ~ 1178359 (+)
ENSDARG00000014103	dkk1a	13: 41022502 ~ 41026398 (+)
ENSDARG00000054878	six2b	12: 25610019 ~ 25612170 (-)
ENSDARG00000056021	sostdc1b	19: 31061718 ~ 31063020 (+)
ENSDARG00000075745	ovgp1	11: 24027715 ~ 24032190 (+)
ENSDARG00000015546	alpl	11: 27968834 ~ 28010171 (+)
ENSDARG00000105061	si:ch73-261i21.5	10: 29793817 ~ 29809105 (-)
ENSDARG00000058730	rdh10a	24: 13251480 ~ 13272843 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
GSE123241 (fgf3 siblings)	neuromast	regeneration	5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000092813

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences