Fish Single-cell RNA Database

GENE ID: ENSDARG00000088634

Symbol	Location	Gene type	Genome version	Species
adcy1b	2: 136346 ~ 155270 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000088634 (adcy1b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000021647	gnai1	4: 22680442 ~ 22714063 (+)
ENSDARG00000088589	ponzr3	7: 22675475 ~ 22677211 (+)
ENSDARG00000087440	ponzr4	7: 22680560 ~ 22684292 (+)
ENSDARG00000079771	pea15	7: 73780936 ~ 73782920 (+)
ENSDARG00000035357	gnb2	5: 38263240 ~ 38297391 (+)
ENSDARG00000095826	smdt1a	3: 1186540 ~ 1190132 (-)
ENSDARG00000032344	pde4a	3: 46628885 ~ 46754730 (+)
ENSDARG00000037921	gng13b	3: 35589212 ~ 35602233 (-)
ENSDARG00000088634	adcy1b	2: 136346 ~ 155270 (-)
ENSDARG00000074233	pde4bb	2: 14444276 ~ 14587224 (-)
ENSDARG00000019278	NA	2: 5300405 ~ 5311253 (+)
ENSDARG00000096661	si:ch211-286b5.5	1: 55264025 ~ 55270966 (-)
ENSDARG00000056806	pde5aa	1: 14257158 ~ 14258409 (-)
ENSDARG00000075929	si:dkey-219c10.4	9: 38140911 ~ 38156894 (-)
ENSDARG00000060875	pde1a	9: 44498182 ~ 44642108 (-)
ENSDARG00000055514	icn2	16: 23487051 ~ 23491093 (+)
ENSDARG00000069026	adcy1a	20: 6894886 ~ 7000225 (-)
ENSDARG00000030644	gnai3	8: 25145464 ~ 25220957 (+)
ENSDARG00000055377	gnb5b	18: 39067575 ~ 39105519 (+)
ENSDARG00000071601	pvalb9	12: 17695986 ~ 17698669 (-)
ENSDARG00000104478	cap2	19: 46158078 ~ 46210904 (+)
ENSDARG00000016350	cap1	19: 43715911 ~ 43737071 (+)
ENSDARG00000024381	msto1	19: 776208 ~ 791016 (-)
ENSDARG00000076839	ftr86	15: 509126 ~ 516750 (+)
ENSDARG00000076650	pde9al	15: 22333778 ~ 22348626 (+)
ENSDARG00000063706	pde8b	21: 7642403 ~ 7691293 (-)
ENSDARG00000018174	gnai2a	11: 34921492 ~ 35042194 (+)
ENSDARG00000002411	pde4cb	11: 6684968 ~ 6794144 (+)
ENSDARG00000115383	gnb4b	11: 44226200 ~ 44447359 (+)
ENSDARG00000045415	gnal	24: 8904135 ~ 8973300 (+)
ENSDARG00000045305	pde7a	24: 24733307 ~ 24797455 (-)
ENSDARG00000044760	gnaia	25: 20997671 ~ 21031007 (-)
ENSDARG00000093480	pamr1	25: 37340722 ~ 37365602 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000088634

EXPRESSION

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