Fish Single-cell RNA Database

GENE ID: ENSDARG00000086314

Symbol	Location	Gene type	Genome version	Species
NA	2: 3428357 ~ 3429454 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000086314 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000058389	ccl19a.1	5: 13353866 ~ 13392962 (+)
ENSDARG00000115610	ccl25a	2: 53582357 ~ 53592532 (-)
ENSDARG00000086314	NA	2: 3428357 ~ 3429454 (+)
ENSDARG00000041919	ccl38.1	20: 39332579 ~ 39333799 (-)
ENSDARG00000041835	ccl38a.5	20: 38279523 ~ 38280392 (+)
ENSDARG00000041917	ccl38a.4	20: 38285671 ~ 38286553 (+)
ENSDARG00000098012	itgae.1	15: 17196527 ~ 17213723 (-)
ENSDARG00000073872	tpst1	15: 20652686 ~ 20779624 (-)
ENSDARG00000074772	ccl44	11: 6182680 ~ 6188413 (-)
ENSDARG00000070873	ccl25b	11: 6259048 ~ 6265723 (-)
ENSDARG00000099155	tpst2	10: 44677632 ~ 44691944 (+)
ENSDARG00000094002	ccl34b.4	24: 27416592 ~ 27419198 (-)
ENSDARG00000093098	ccl34b.8	24: 27450085 ~ 27452488 (-)
ENSDARG00000071499	cxcl32b.1	24: 27511734 ~ 27512851 (+)
ENSDARG00000094511	ccl20b	24: 26006730 ~ 26009612 (+)
ENSDARG00000102945	ccl39.2	25: 13017489 ~ 13029702 (-)
ENSDARG00000096060	ccl39a.10	25: 25202213 ~ 25202523 (+)
ENSDARG00000102519	ccl33.2	25: 12849609 ~ 12851118 (+)
ENSDARG00000070378	ccl35.2	25: 25172983 ~ 25176139 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	NA	NA	NA
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000086314

EXPRESSION

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