Fish Single-cell RNA Database

GENE ID: ENSDARG00000053502

Symbol	Location	Gene type	Genome version	Species
cryaa	1: 29096881 ~ 29100923 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000053502 (cryaa), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000036140	crybgx	7: 34222433 ~ 34225011 (-)
ENSDARG00000101380	cryabb	5: 57641554 ~ 57650998 (+)
ENSDARG00000052450	hspb2	5: 57629207 ~ 57641257 (-)
ENSDARG00000041301	crybb3	5: 6489260 ~ 6508250 (-)
ENSDARG00000033382	grifin	3: 41784542 ~ 41795917 (-)
ENSDARG00000030349	cryba2a	6: 13780205 ~ 13783634 (-)
ENSDARG00000011998	bfsp2	2: 32761130 ~ 32769759 (-)
ENSDARG00000016074	cryz	2: 11100613 ~ 11120220 (-)
ENSDARG00000102129	crygn1	2: 51783120 ~ 51815413 (+)
ENSDARG00000015076	gja8b	1: 47446032 ~ 47448850 (+)
ENSDARG00000035080	hsf2bp	1: 29102011 ~ 29139183 (-)
ENSDARG00000053502	cryaa	1: 29096881 ~ 29100923 (+)
ENSDARG00000041179	crygm5	9: 22345047 ~ 22352280 (-)
ENSDARG00000025943	crygs3	9: 22351443 ~ 22366295 (+)
ENSDARG00000021889	gja3	9: 21407987 ~ 21409466 (+)
ENSDARG00000069451	gja8a	9: 30430188 ~ 30432778 (-)
ENSDARG00000041171	crygs2	9: 27733334 ~ 27738110 (-)
ENSDARG00000041925	cryba2b	9: 11554089 ~ 11560432 (-)
ENSDARG00000055723	hsp70l	8: 4798158 ~ 4800911 (+)
ENSDARG00000053512	crybb2	8: 42629748 ~ 42636278 (+)
ENSDARG00000062892	foxe3	8: 19668654 ~ 19670305 (+)
ENSDARG00000076312	myot	14: 12222543 ~ 12307522 (-)
ENSDARG00000074919	NA	13: 985442 ~ 992458 (-)
ENSDARG00000013251	hsf4	18: 22739732 ~ 22753637 (-)
ENSDARG00000041141	cryba1a	15: 28086193 ~ 28107505 (-)
ENSDARG00000042621	cryaba	15: 18119618 ~ 18124678 (-)
ENSDARG00000037285	mipa	23: 27068225 ~ 27072774 (+)
ENSDARG00000068507	crybb1	10: 44021147 ~ 44027391 (-)
ENSDARG00000024548	cryba4	10: 44042033 ~ 44051808 (+)
ENSDARG00000030411	crygn2	24: 41305391 ~ 41312459 (-)
ENSDARG00000042992	crygs1	22: 11710467 ~ 11714158 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Lens (cluster: 25)	potential marker	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000053502

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences