Fish Single-cell RNA Database

GENE ID: ENSDARG00000013251

Symbol	Location	Gene type	Genome version	Species
hsf4	18: 22739732 ~ 22753637 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000013251 (hsf4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000041301	crybb3	5: 6489260 ~ 6508250 (-)
ENSDARG00000038089	NA	3: 27929505 ~ 27952302 (+)
ENSDARG00000040608	gcnt7	6: 56097971 ~ 56111829 (-)
ENSDARG00000016255	chmp4ba	6: 49901465 ~ 49920320 (+)
ENSDARG00000011998	bfsp2	2: 32761130 ~ 32769759 (-)
ENSDARG00000102129	crygn1	2: 51783120 ~ 51815413 (+)
ENSDARG00000078022	fyco1b	2: 50722439 ~ 50765082 (+)
ENSDARG00000015076	gja8b	1: 47446032 ~ 47448850 (+)
ENSDARG00000053502	cryaa	1: 29096881 ~ 29100923 (+)
ENSDARG00000021889	gja3	9: 21407987 ~ 21409466 (+)
ENSDARG00000069451	gja8a	9: 30430188 ~ 30432778 (-)
ENSDARG00000041171	crygs2	9: 27733334 ~ 27738110 (-)
ENSDARG00000041295	lim2.5	16: 50166421 ~ 50181206 (-)
ENSDARG00000053512	crybb2	8: 42629748 ~ 42636278 (+)
ENSDARG00000007323	chmp4bb	8: 45361735 ~ 45375108 (+)
ENSDARG00000023861	dnase1l1l	8: 25351863 ~ 25358860 (+)
ENSDARG00000032929	cryba1l1	14: 46313135 ~ 46321016 (+)
ENSDARG00000070069	pitx3	13: 7555720 ~ 7575216 (-)
ENSDARG00000074919	NA	13: 985442 ~ 992458 (-)
ENSDARG00000013251	hsf4	18: 22739732 ~ 22753637 (-)
ENSDARG00000089885	slc16a12b	12: 16967715 ~ 16986968 (+)
ENSDARG00000015445	lim2.4	19: 10537443 ~ 10554352 (-)
ENSDARG00000041141	cryba1a	15: 28086193 ~ 28107505 (-)
ENSDARG00000042621	cryaba	15: 18119618 ~ 18124678 (-)
ENSDARG00000028335	hmga1a	23: 3751451 ~ 3759692 (-)
ENSDARG00000077918	dnase2b	11: 8170948 ~ 8179145 (+)
ENSDARG00000068507	crybb1	10: 44021147 ~ 44027391 (-)
ENSDARG00000024548	cryba4	10: 44042033 ~ 44051808 (+)
ENSDARG00000030411	crygn2	24: 41305391 ~ 41312459 (-)
ENSDARG00000059015	lim2.2	22: 3223489 ~ 3232634 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000013251

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences