Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
si:ch211-188p14.4 | 1: 59406243 ~ 59415948 (-) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment |
Periderm cells (cluster: 17) |
potential marker |
NA |
|
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment |
Periderm cells (cluster: 14) |
potential marker |
NA |
|
GSE158142 (18hpf) | head | baseline | 18hpf, 18 somites, untreatment |
Periderm cells (cluster: 17) |
potential marker |
NA |
|
GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment |
Periderm cells (cluster: 11) |
potential marker |
NA |
|
GSE158142 (24hpf) | head | baseline | 24hpf, untreatment |
Periderm cells (cluster: 8) |
potential marker |
NA |
|
GSE158142 (2dpf) | head | baseline | 2dpf, untreatment |
Eye (cluster: 15) |
potential marker |
NA |
|
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment |
Periderm cells (cluster: 9) |
potential marker |
NA |
|
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment | ||||
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | ||||
GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | ||||
GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | ||||
GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | ||||
GSE130526 (fin) | dorsal and anal fin | baseline | adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry | ||||
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | ||||
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | ||||
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | ||||
GSE158142 (14hpf) | head | baseline | 14hpf, 10 somites, untreatment | ||||
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | ||||
GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
GSE123241 (fgf3 siblings) | neuromast | regeneration | 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory | ||||
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae | ||||
PRJNA605021 (hair cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae | ||||
GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment | ||||
GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment | ||||
GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment | ||||
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | ||||
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT | ||||
GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | ||||
GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT |