Fish Single-cell RNA Database

GENE ID: ENSDARG00000006678

Symbol	Location	Gene type	Genome version	Species
pth2ra	9: 29122039 ~ 29321665 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000006678 (pth2ra), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000031737	pthlha	4: 612363 ~ 626550 (+)
ENSDARG00000094854	ms4a17a.9	4: 76608282 ~ 76633286 (+)
ENSDARG00000020252	btbd10b	7: 66112194 ~ 66133786 (-)
ENSDARG00000091961	pth1b	7: 66136409 ~ 66137065 (-)
ENSDARG00000056590	calca	7: 27680556 ~ 27696958 (-)
ENSDARG00000035891	acana	7: 48761646 ~ 48787379 (+)
ENSDARG00000061051	brinp3a.2	6: 36127505 ~ 36198052 (-)
ENSDARG00000060395	si:dkey-57k2.7	2: 37449294 ~ 37458527 (-)
ENSDARG00000056704	NA	9: 28778649 ~ 28867908 (-)
ENSDARG00000069301	tmem177	9: 29034221 ~ 29039506 (-)
ENSDARG00000006678	pth2ra	9: 29122039 ~ 29321665 (-)
ENSDARG00000069500	hs6st3b	9: 29338986 ~ 29427576 (-)
ENSDARG00000030633	plekhm3	9: 28140089 ~ 28208549 (+)
ENSDARG00000005924	serpina10a	20: 27371394 ~ 27381691 (-)
ENSDARG00000022951	pth2	17: 33495194 ~ 33499023 (+)
ENSDARG00000075735	cxxc5b	14: 7932973 ~ 7967428 (+)
ENSDARG00000095339	si:dkeyp-44a8.4	14: 6628863 ~ 6727717 (-)
ENSDARG00000062086	kiaa1549lb	18: 28102620 ~ 28156256 (+)
ENSDARG00000088898	caln1	15: 16564692 ~ 16704417 (-)
ENSDARG00000095001	si:dkey-194e6.2	23: 40788357 ~ 40796992 (-)
ENSDARG00000067808	si:dkeyp-27c8.1	23: 40772273 ~ 40788933 (-)
ENSDARG00000092956	si:dkeyp-27c8.1	23: 40810286 ~ 40817792 (-)
ENSDARG00000089078	si:ch211-160j14.3	21: 32089491 ~ 32119965 (-)
ENSDARG00000075698	nkpd1	11: 33284837 ~ 33291898 (+)
ENSDARG00000013422	slc8a1a	11: 30535943 ~ 30612166 (-)
ENSDARG00000063433	atp2b2	11: 1148701 ~ 1291012 (-)
ENSDARG00000045413	gcm2	24: 8827603 ~ 8831912 (-)
ENSDARG00000071070	pthlhb	25: 3257932 ~ 3262318 (-)
ENSDARG00000045383	gpr22b	25: 3378135 ~ 3393705 (-)
ENSDARG00000093738	pth1a	25: 17860798 ~ 17861696 (+)
ENSDARG00000062674	btbd10a	25: 17862338 ~ 17892711 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells	NA	NA	NA
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000006678

EXPRESSION

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