Fish Single-cell RNA Database

GENE ID: ENSDARG00000095050

Symbol	Location	Gene type	Genome version	Species
si:dkey-7f3.14	16: 23923746 ~ 23924845 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	Hepatocytes (cluster: 1)	potential marker	NA
	GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	Hepatocytes (cluster: 1)	potential marker	NA
	GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	Hepatocytes (cluster: 1)	potential marker	NA
	PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases	Melanoma cells (cluster: 8)	potential marker	NA
	PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases	Melanoma cells (cluster: 8)	potential marker	NA
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
	PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
	GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
	GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
	GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
	GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
	GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
	GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
	GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
	PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
	PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)

After clicking the magnifying glass button, the clustering and expression information will be displayed below.