Fish Single-cell RNA Database

GENE ID: ENSDARG00000102094

Symbol	Location	Gene type	Genome version	Species
wu:fd46c06	16: 31658196 ~ 31661536 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000102094 (wu:fd46c06), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000039887	c1qbp	5: 3914403 ~ 3927763 (-)
ENSDARG00000104875	bspry	5: 54400971 ~ 54415064 (+)
ENSDARG00000020265	angptl6	3: 54524227 ~ 54544612 (-)
ENSDARG00000036650	cdadc1	1: 46617006 ~ 46632966 (-)
ENSDARG00000038424	c4b	16: 16665203 ~ 16701718 (-)
ENSDARG00000051912	hpxb	16: 2394193 ~ 2414063 (-)
ENSDARG00000102094	wu:fd46c06	16: 31658196 ~ 31661536 (-)
ENSDARG00000015065	c4	15: 32351886 ~ 32383529 (-)
ENSDARG00000061383	serpinf2b	15: 26540981 ~ 26552652 (-)
ENSDARG00000005425	wdfy1	15: 43208593 ~ 43238220 (-)
ENSDARG00000028780	gzmk	21: 19517492 ~ 19520320 (+)
ENSDARG00000090380	gzma	21: 19525141 ~ 19527254 (+)
ENSDARG00000076448	serpinf2a	21: 40092301 ~ 40104916 (+)
ENSDARG00000095355	si:dkey-78l4.7	22: 19473804 ~ 19476271 (+)
ENSDARG00000093491	si:dkey-78l4.8	22: 19478140 ~ 19482177 (+)
ENSDARG00000093450	si:dkey-78l4.10	22: 19494996 ~ 19496507 (+)
ENSDARG00000095175	si:dkey-78l4.12	22: 19517610 ~ 19518789 (+)
ENSDARG00000014623	si:ch211-212d10.1	22: 18530395 ~ 18537415 (+)
ENSDARG00000092814	si:dkey-21e2.3	22: 19175651 ~ 19183506 (+)
ENSDARG00000094840	si:dkey-21e2.13	22: 19277361 ~ 19279253 (+)
ENSDARG00000095729	si:dkey-21e2.12	22: 19262161 ~ 19268280 (+)
ENSDARG00000095005	si:dkey-21e2.10	22: 19247255 ~ 19250734 (+)
ENSDARG00000095572	si:dkey-21e2.14	22: 19283978 ~ 19285300 (+)
ENSDARG00000092532	si:dkey-21e2.8	22: 19188809 ~ 19268278 (+)
ENSDARG00000095384	si:dkey-78l4.2	22: 19405517 ~ 19408101 (+)
ENSDARG00000098651	si:dkey-21e2.7	22: 19218733 ~ 19233839 (+)
ENSDARG00000092518	si:dkey-21e2.11	22: 19264188 ~ 19265780 (+)
ENSDARG00000095438	si:dkey-78l4.4	22: 19415080 ~ 19417750 (+)
ENSDARG00000069673	chid1	25: 3788074 ~ 3800889 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000102094

EXPRESSION

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