Fish Single-cell RNA Database

GENE ID: ENSDARG00000091817

Symbol	Location	Gene type	Genome version	Species
CR391998.1	16: 4055331 ~ 4071526 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	Epidermal cells (cluster: 15)	potential marker	NA
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	Ionocyte progenitors (cluster: 6)	potential marker	NA
	PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	Ciliated olfactory sensory neuron (cluster: 5)	potential marker	NA
	PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	Ciliated olfactory sensory neuron (cluster: 1) Microvillus olfactory sensory neuron (cluster: 5)	potential marker potential marker	NA NA
	PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	Ciliated olfactory sensory neuron (cluster: 1) Microvillus olfactory sensory neuron (cluster: 3)	potential marker potential marker	NA NA
	PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
	PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
	PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
	PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
	GSE158142 (24hpf)	head	baseline	24hpf, untreatment
	GSE158142 (3dpf)	head	baseline	3dpf, untreatment
	PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
	GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
	GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis
	GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
	PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
	GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
	PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture

After clicking the magnifying glass button, the clustering and expression information will be displayed below.