Fish Single-cell RNA Database

GENE ID: ENSDARG00000060124

Symbol	Location	Gene type	Genome version	Species
timm17b	8: 44921123 ~ 44926077 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000060124 (timm17b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045517	itih5	4: 25220674 ~ 25245817 (+)
ENSDARG00000032919	chchd3a	4: 15490215 ~ 15603588 (-)
ENSDARG00000091413	NA	5: 62988916 ~ 62994386 (+)
ENSDARG00000037909	timm29	3: 34180835 ~ 34182587 (+)
ENSDARG00000102822	pam16	3: 12345280 ~ 12352793 (-)
ENSDARG00000038076	romo1	6: 50401620 ~ 50404732 (-)
ENSDARG00000069116	timm10	1: 44390470 ~ 44394499 (+)
ENSDARG00000038309	dnajc15	9: 18215940 ~ 18278580 (+)
ENSDARG00000092112	tomm40	16: 25673107 ~ 25680748 (-)
ENSDARG00000032535	praf2	8: 44893628 ~ 44904723 (-)
ENSDARG00000060124	timm17b	8: 44921123 ~ 44926077 (-)
ENSDARG00000043648	pnck	8: 9149436 ~ 9167115 (+)
ENSDARG00000043865	timm9	17: 11372531 ~ 11377195 (+)
ENSDARG00000071396	timm23a	12: 35046704 ~ 35051441 (+)
ENSDARG00000045146	tomm22	12: 19348538 ~ 19353771 (+)
ENSDARG00000099353	slc25a13	19: 41290713 ~ 41371990 (-)
ENSDARG00000036721	tomm40l	19: 10831362 ~ 10845087 (+)
ENSDARG00000031098	timm50	15: 20475694 ~ 20528494 (-)
ENSDARG00000003206	chchd6a	23: 34047413 ~ 34185019 (+)
ENSDARG00000037140	pfkfb1	23: 26017227 ~ 26037969 (+)
ENSDARG00000056037	itih6	23: 26039524 ~ 26056072 (+)
ENSDARG00000043898	timm10b	10: 24762216 ~ 24765988 (-)
ENSDARG00000071594	NA	24: 16140423 ~ 16147705 (+)
ENSDARG00000044420	dnajc19	22: 37534094 ~ 37541020 (+)
ENSDARG00000104771	timm44	22: 4447387 ~ 4466724 (+)
ENSDARG00000044526	camk1ga	22: 1049367 ~ 1069407 (+)
--	sfmbt1	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000060124

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences