Fish Single-cell RNA Database

GENE ID: ENSDARG00000091321

Symbol	Location	Gene type	Genome version	Species
CABZ01088229.1	14: 146857 ~ 152309 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000091321 (CABZ01088229.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000036420	si:dkey-33c9.6	7: 20383841 ~ 20436781 (+)
ENSDARG00000095180	abr	5: 62611400 ~ 62642718 (+)
ENSDARG00000005414	grapa	3: 39630930 ~ 39648021 (-)
ENSDARG00000101169	grap2b	6: 427317 ~ 442276 (-)
ENSDARG00000038909	msl2a	2: 25124498 ~ 25129409 (+)
ENSDARG00000022668	grapb	1: 8165340 ~ 8192418 (-)
ENSDARG00000036156	fnbp1a	8: 11578318 ~ 11640240 (-)
ENSDARG00000042329	NA	8: 30501170 ~ 30593651 (+)
ENSDARG00000091321	CABZ01088229.1	14: 146857 ~ 152309 (+)
ENSDARG00000104691	cd79b	12: 4900981 ~ 4906924 (+)
ENSDARG00000099954	plekhm1	12: 4920451 ~ 4963153 (+)
ENSDARG00000104255	arhgap27	12: 4971515 ~ 5044931 (+)
ENSDARG00000068883	tspan13a	15: 34592215 ~ 34599768 (+)
ENSDARG00000078191	zbtb46	23: 13721826 ~ 13806495 (+)
ENSDARG00000074023	rbms1a	11: 10909183 ~ 10960394 (+)
ENSDARG00000053204	snx22	25: 5992789 ~ 6011047 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	6dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000091321

EXPRESSION

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