Fish Single-cell RNA Database

GENE ID: ENSDARG00000092725

Symbol	Location	Gene type	Genome version	Species
si:dkey-188i13.8	13: 37633904 ~ 37636147 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	Microvillus olfactory sensory neuron (cluster: 8)	potential marker	NA
	PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	Microvillus olfactory sensory neuron (cluster: 5)	potential marker	NA
	PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	Microvillus olfactory sensory neuron (cluster: 3)	potential marker	NA
	GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Melanophores (cluster: 45)	potential marker	NA
	GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
	PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
	PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
	GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
	GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
	GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
	GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
	GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
	PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
	GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
	GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
	PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
	PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases

After clicking the magnifying glass button, the clustering and expression information will be displayed below.