|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
PRJNA564810 (5dpf) |
embryo |
baseline |
5dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
GSE161712 (M. marinum) |
granulomas |
disease |
adult, infected with bacteria of M. marinum |
NA |
NA |
NA |
|
PRJNA415636 (pancreas, liver) |
hepatopancreas |
baseline |
adult, Zebrabow M, pancreas and liver |
NA |
NA |
NA |
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
NA |
NA |
NA |
|
GSE150498 (nod2-|-, 2X DSS+BZA) |
intestine |
disease |
6dpf, nod2-/-, 2X DSS+BZA |
NA |
NA |
NA |
|
GSE137784 (HCC, HepABC) |
liver |
disease |
6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
NA |
NA |
NA |
|
GSE137784 (HCC, CreLox) |
liver |
disease |
6mpf, male, isolated from the zebrafish without HCC |
NA |
NA |
NA |
|
PRJNA415636 (primary pancreatic islet) |
primary pancreatic islet |
baseline |
adult, Zebrabow M, primary pancreatic islet |
NA |
NA |
NA |
|
GSE175929 (5mpf) |
retina |
baseline |
5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |