Fish Single-cell RNA Database

GENE ID: ENSDARG00000090421

Symbol	Location	Gene type	Genome version	Species
NA	15: 2559875 ~ 2578139 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000090421 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000090468	ppp1r3aa	4: 6572364 ~ 6580610 (+)
ENSDARG00000034434	igf1rb	7: 15446229 ~ 15610129 (+)
ENSDARG00000060330	si:ch211-284e13.4	5: 38088594 ~ 38094130 (-)
ENSDARG00000011948	insra	2: 37544951 ~ 37632896 (-)
ENSDARG00000088202	sh3d19	1: 24376698 ~ 24462691 (-)
ENSDARG00000003046	sorbs2a	1: 17747656 ~ 17803614 (-)
ENSDARG00000061697	ca14	16: 9540033 ~ 9558103 (+)
ENSDARG00000043317	kita	20: 22335511 ~ 22378401 (-)
ENSDARG00000058567	avp	8: 1148876 ~ 1157380 (+)
ENSDARG00000061603	sorbs2b	14: 29807097 ~ 29906209 (-)
ENSDARG00000103435	sorbs1	13: 23132666 ~ 23226460 (+)
ENSDARG00000076247	dlk2	13: 4205724 ~ 4213909 (+)
ENSDARG00000027423	igf1ra	18: 20881462 ~ 21047580 (-)
ENSDARG00000009958	cbl	15: 23208042 ~ 23265405 (+)
ENSDARG00000090421	NA	15: 2559875 ~ 2578139 (+)
ENSDARG00000021611	si:dkey-151g10.3	23: 25172682 ~ 25222673 (+)
ENSDARG00000028699	crkl	21: 18950575 ~ 18958079 (+)
ENSDARG00000015199	cblb	10: 28587446 ~ 28733002 (+)
ENSDARG00000071524	insrb	22: 10927370 ~ 11054244 (-)
ENSDARG00000088813	ppp1r3ab	25: 21787173 ~ 21795930 (-)
ENSDARG00000070917	kitlga	25: 18118906 ~ 18140537 (-)
--	wu:fy63c09	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA641144 (P_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo primary tumors	NA	NA	NA
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000090421

EXPRESSION

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