Fish Single-cell RNA Database

GENE ID: ENSDARG00000077211

Symbol	Location	Gene type	Genome version	Species
or112-1	15: 5360407 ~ 5364508 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000077211 (or112-1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000091877	or137-7	6: 52895008 ~ 52897484 (+)
ENSDARG00000117118	taar12e	20: 46060635 ~ 46061650 (-)
ENSDARG00000094548	taar12a	20: 46084808 ~ 46085840 (-)
ENSDARG00000069206	taar15	20: 46206998 ~ 46207984 (+)
ENSDARG00000041560	NA	18: 17493859 ~ 17507010 (+)
ENSDARG00000005942	vmn2r1	18: 34225520 ~ 34242558 (+)
ENSDARG00000116427	olfcg1	18: 32563554 ~ 32567412 (+)
ENSDARG00000104746	or130-1	15: 14826966 ~ 14851893 (+)
ENSDARG00000077211	or112-1	15: 5360407 ~ 5364508 (+)
ENSDARG00000003344	trpc2b	21: 30746348 ~ 30765533 (+)
ENSDARG00000032380	ompb	21: 22188010 ~ 22189719 (-)
ENSDARG00000114718	taar20p	10: 40447708 ~ 40448760 (-)
ENSDARG00000095748	taar18j	10: 40583930 ~ 40584955 (+)
ENSDARG00000112619	si:ch211-238p8.35	10: 40657949 ~ 40658992 (+)
ENSDARG00000116284	taar19l	10: 40660772 ~ 40661767 (+)
ENSDARG00000059315	ora3	22: 381143 ~ 382955 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000077211

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences