Fish Single-cell RNA Database

GENE ID: ENSDARG00000055893

Symbol	Location	Gene type	Genome version	Species
nmnat1-rbp7a	23: 29554591 ~ 29569827 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000055893 (nmnat1-rbp7a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000030598	nampta	4: 3358383 ~ 3385452 (+)
ENSDARG00000037913	nmrk1	3: 34597741 ~ 34599662 (-)
ENSDARG00000067848	nmrk2	2: 55982300 ~ 55990329 (+)
ENSDARG00000101378	nadsyn1	2: 28672152 ~ 28692928 (+)
ENSDARG00000060362	nadkb	2: 37267241 ~ 37281748 (-)
ENSDARG00000027930	naprt	20: 52273446 ~ 52314299 (-)
ENSDARG00000098313	nadka	8: 53064920 ~ 53069540 (+)
ENSDARG00000068064	sirt1	13: 50345345 ~ 50366950 (-)
ENSDARG00000092522	nnt2	18: 5543677 ~ 5557060 (+)
ENSDARG00000078738	si:dkey-145c18.3	18: 33779440 ~ 33796526 (+)
ENSDARG00000076694	NA	18: 33788340 ~ 33795749 (+)
ENSDARG00000101844	mibp2	18: 5490668 ~ 5497405 (+)
ENSDARG00000037017	ube4b	23: 29507315 ~ 29553691 (-)
ENSDARG00000055893	nmnat1-rbp7a	23: 29554591 ~ 29569827 (-)
ENSDARG00000007181	nadk2	21: 22330005 ~ 22346723 (+)
ENSDARG00000023536	nnt	21: 19763546 ~ 19828423 (-)
ENSDARG00000027183	namptb	11: 19729771 ~ 19775182 (-)
ENSDARG00000101362	mibp	22: 5118361 ~ 5122557 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000055893

EXPRESSION

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