Fish Single-cell RNA Database

GENE ID: ENSDARG00000092026

Symbol	Location	Gene type	Genome version	Species
zgc:173545	11: 18157260 ~ 18158883 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000092026 (zgc:173545), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076476	zgc:173770	4: 77132096 ~ 77135076 (-)
ENSDARG00000116005	zgc:171446	3: 3402223 ~ 3413680 (-)
ENSDARG00000115205	zgc:171445	3: 3415921 ~ 3428944 (-)
ENSDARG00000053877	cpdb	21: 39197418 ~ 39226333 (+)
ENSDARG00000090870	si:ch1073-263o8.2	21: 43630438 ~ 43636631 (-)
ENSDARG00000093255	si:dkey-229d11.3	21: 43657216 ~ 43666420 (-)
ENSDARG00000092026	zgc:173545	11: 18157260 ~ 18158883 (+)
ENSDARG00000076949	zgc:173837	10: 19595009 ~ 19598009 (+)
ENSDARG00000079681	CABZ01059627.2	10: 19573791 ~ 19575962 (+)
ENSDARG00000095281	zgc:152652	24: 9981933 ~ 9991286 (-)
ENSDARG00000078638	zgc:171750	24: 10003426 ~ 10006158 (-)
ENSDARG00000092924	zgc:171474	24: 10010630 ~ 10014624 (-)
ENSDARG00000045423	si:ch211-146l10.8	24: 10027902 ~ 10032784 (+)
ENSDARG00000087583	zgc:171717	22: 25289360 ~ 25290573 (+)
ENSDARG00000116290	si:ch211-250e5.16	22: 25753972 ~ 25756668 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000092026

EXPRESSION

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