Fish Single-cell RNA Database

GENE ID: ENSDARG00000076949

Symbol	Location	Gene type	Genome version	Species
zgc:173837	10: 19595009 ~ 19598009 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000076949 (zgc:173837), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076476	zgc:173770	4: 77132096 ~ 77135076 (-)
ENSDARG00000079034	zpax4	7: 20577694 ~ 20582921 (-)
ENSDARG00000074764	zgc:171426	3: 3469600 ~ 3481763 (+)
ENSDARG00000092090	si:ch211-125e6.12	9: 33216945 ~ 33218269 (+)
ENSDARG00000034989	retsatl	9: 44994214 ~ 44998722 (+)
ENSDARG00000055415	zp2l1	9: 35631440 ~ 35633827 (-)
ENSDARG00000042130	zp3a.2	20: 33987465 ~ 33989427 (+)
ENSDARG00000069251	zpax1	20: 43737022 ~ 43743700 (-)
ENSDARG00000032431	mpv17	20: 38671894 ~ 38716529 (+)
ENSDARG00000019706	zar1	20: 23423814 ~ 23426339 (-)
ENSDARG00000089966	si:zfos-1505d6.3	20: 54299419 ~ 54301276 (+)
ENSDARG00000115457	zp3.2	17: 2587132 ~ 2590222 (-)
ENSDARG00000092498	si:dkeyp-46h3.2	19: 27586823 ~ 27588842 (-)
ENSDARG00000094392	si:dkey-229d11.5	21: 43644573 ~ 43666481 (-)
ENSDARG00000093353	si:ch211-263m18.4	21: 43653826 ~ 43656125 (-)
ENSDARG00000093255	si:dkey-229d11.3	21: 43657216 ~ 43666420 (-)
ENSDARG00000070714	zgc:173544	11: 16014527 ~ 16021522 (-)
ENSDARG00000079534	zgc:175135	11: 18130300 ~ 18132066 (+)
ENSDARG00000070709	wu:fi42e03	11: 29537756 ~ 29540033 (+)
ENSDARG00000092026	zgc:173545	11: 18157260 ~ 18158883 (+)
ENSDARG00000076949	zgc:173837	10: 19595009 ~ 19598009 (+)
ENSDARG00000079681	CABZ01059627.2	10: 19573791 ~ 19575962 (+)
ENSDARG00000095281	zgc:152652	24: 9981933 ~ 9991286 (-)
ENSDARG00000078638	zgc:171750	24: 10003426 ~ 10006158 (-)
ENSDARG00000092924	zgc:171474	24: 10010630 ~ 10014624 (-)
ENSDARG00000045424	zgc:173856	24: 10018653 ~ 10021341 (-)
ENSDARG00000045423	si:ch211-146l10.8	24: 10027902 ~ 10032784 (+)
ENSDARG00000086221	si:ch211-226h8.4	22: 25184459 ~ 25185570 (+)
--	ddx41	--
--	wu:fi34b01	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	NA	NA	NA
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000076949

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences