Fish Single-cell RNA Database

GENE ID: ENSDARG00000054534

Symbol	Location	Gene type	Genome version	Species
NA	10: 42903091 ~ 42923385 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000054534 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076117	stard5	7: 11595264 ~ 11605185 (-)
ENSDARG00000078512	acaca	5: 56308622 ~ 56416188 (-)
ENSDARG00000061994	acacb	5: 19337108 ~ 19383694 (+)
ENSDARG00000014003	stard8	5: 35786141 ~ 35867256 (+)
ENSDARG00000073985	pctp	3: 10407458 ~ 10425313 (-)
ENSDARG00000005359	sucla2	6: 10037252 ~ 10056640 (+)
ENSDARG00000105190	rhbdl3	6: 18623492 ~ 18698669 (-)
ENSDARG00000055099	fam184b	1: 23506525 ~ 23557877 (-)
ENSDARG00000079317	dlc1	1: 15293531 ~ 15329277 (-)
ENSDARG00000062549	acmsd	9: 23244292 ~ 23253870 (-)
ENSDARG00000002745	tdh	20: 18992679 ~ 18998022 (+)
ENSDARG00000007127	acat2	20: 30922595 ~ 30931146 (-)
ENSDARG00000042853	ivd	17: 31346560 ~ 31360956 (-)
ENSDARG00000044142	acss1	17: 25833947 ~ 25853922 (+)
ENSDARG00000104732	mlycd	18: 14233553 ~ 14274803 (-)
ENSDARG00000098954	stard13b	15: 33467298 ~ 33640890 (-)
ENSDARG00000037781	acss2	23: 9230431 ~ 9291892 (+)
ENSDARG00000015918	dlat	21: 23019372 ~ 23035120 (-)
ENSDARG00000044914	suclg2	11: 16738179 ~ 16975190 (-)
ENSDARG00000086271	acyp2	11: 43102421 ~ 43104475 (-)
ENSDARG00000079542	stard13a	10: 34315719 ~ 34404768 (+)
ENSDARG00000074858	stard7	10: 17700016 ~ 17710637 (-)
ENSDARG00000045888	acat1	10: 38663917 ~ 38698966 (+)
ENSDARG00000054534	NA	10: 42903091 ~ 42923385 (-)
ENSDARG00000087040	rhbdl1	24: 37598441 ~ 37623496 (+)
ENSDARG00000033889	spty2d1	25: 24233010 ~ 24248000 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000054534

EXPRESSION

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