|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
GSE144944 (fgfr3 +|+) |
cranial vault |
baseline |
1mpf, fgfr3 +/+ |
NA |
NA |
NA |
|
GSE144944 (fgfr3 -|-) |
cranial vault |
growth |
1mpf, fgfr3 -/- |
NA |
NA |
NA |
|
GSE130526 (fin) |
dorsal and anal fin |
baseline |
adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry |
NA |
NA |
NA |
|
GSE106587 (WT) |
embryo |
baseline |
12hpf, 6 somites, wild-type TLAB embryo |
NA |
NA |
NA |
|
GSE126647 (control) |
embryo |
baseline |
1.17dpf, control nkx2.5:ZsYellow+ cells |
NA |
NA |
NA |
|
GSE126647 (Pbx4-depleted) |
embryo |
growth |
1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells |
NA |
NA |
NA |
|
PRJNA734348 (dome, control) |
embryo |
baseline |
4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) |
NA |
NA |
NA |
|
PRJNA734348 (dome, dnmt1) |
embryo |
growth |
4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) |
NA |
NA |
NA |
|
PRJNA640816 (2.9dpf) |
embryo |
baseline |
2.9dpf, FACS isolated -4.9sox10:EGFP+ cells |
NA |
NA |
NA |
|
PRJNA564810 (2dpf) |
embryo |
baseline |
2dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
PRJNA564810 (1dpf) |
embryo |
baseline |
1dpf, a single-cell transcriptome atlas for zebrafish development |
NA |
NA |
NA |
|
GSE161712 (M. marinum) |
granulomas |
disease |
adult, infected with bacteria of M. marinum |
NA |
NA |
NA |
|
PRJNA608912 (kit_2dpi) |
heart |
regeneration |
5mpf, kit mutant, 2 days post injury |
NA |
NA |
NA |
|
PRJNA415636 (heart, blood) |
heart, blood |
baseline |
adult, Zebrabow M, heart and blood |
NA |
NA |
NA |
|
PRJNA415636 (pancreas, liver) |
hepatopancreas |
baseline |
adult, Zebrabow M, pancreas and liver |
NA |
NA |
NA |
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
NA |
NA |
NA |
|
PRJNA668529 (3d) |
olfactory rosette |
disease |
3mpf, intranasal 100ng r-Spike 3 days |
NA |
NA |
NA |
|
GSE148591 (6mpf) |
pituitary |
baseline |
6mpf, male, Sox17:CreERT2 |
NA |
NA |
NA |
|
GSE148591 (3mpf) |
pituitary |
transplant |
3mpf, graft transplantation during early embryogenesis |
NA |
NA |
NA |
|
PRJNA415636 (primary pancreatic islet) |
primary pancreatic islet |
baseline |
adult, Zebrabow M, primary pancreatic islet |
NA |
NA |
NA |
|
GSE122680 (24hpf) |
retina |
baseline |
24hpf, WT, untreatment |
NA |
NA |
NA |
|
PRJNA551501 (2mpf) |
thyroid gland |
baseline |
2mpf, Tg(tg:mVenus-T2A-NTR) |
NA |
NA |
NA |
|
PRJNA551501 (8mpf) |
thyroid gland |
baseline |
8mpf, Tg(tg:mVenus-T2A-NTR) |
NA |
NA |
NA |
|
GSE152982 (wild type) |
trunk |
baseline |
1.25dpf, untreatment |
NA |
NA |
NA |
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
NA |
NA |
NA |
|
GSE176129 (pdgfrb-positive) |
whole body |
baseline |
5dpf, FACS-isolated pdgfrb-positive cells |
NA |
NA |
NA |
|
GSE158099 (WT) |
whole body |
baseline |
16dpf, cd41:GFPlow-WT |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |
|
GSE158099 (runx1 -|-) |
whole body |
hematopoietic |
16dpf, cd41:GFPlow-runx1-/- |
NA |
NA |
NA |