Fish Single-cell RNA Database

GENE ID: ENSDARG00000077609

Symbol	Location	Gene type	Genome version	Species
elfn2a	22: 15009168 ~ 15010688 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000077609 (elfn2a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000010601	mtmr10	7: 30725473 ~ 30771147 (+)
ENSDARG00000054606	mrpl1	5: 38825225 ~ 38834564 (+)
ENSDARG00000059582	sowahcb	6: 68220 ~ 69904 (+)
ENSDARG00000020771	tnr	2: 35240485 ~ 35474115 (+)
ENSDARG00000037484	tmem192	1: 19649545 ~ 19665774 (+)
ENSDARG00000068691	kctd4	9: 18876036 ~ 18877597 (-)
ENSDARG00000042630	hebp2	20: 30894093 ~ 30901034 (-)
ENSDARG00000103732	plp1a	14: 14577246 ~ 14596699 (+)
ENSDARG00000055463	lrit3a	14: 36328425 ~ 36345175 (-)
ENSDARG00000093182	eif2ak1	12: 17591786 ~ 17602958 (-)
ENSDARG00000007891	meox1	12: 27462225 ~ 27469267 (+)
ENSDARG00000071251	ppp1r18	19: 823945 ~ 840530 (+)
ENSDARG00000056084	igsf21b	23: 21638258 ~ 21661916 (+)
ENSDARG00000102180	shroom3	21: 5635420 ~ 5781802 (+)
ENSDARG00000060829	car15	10: 42027285 ~ 42039169 (-)
ENSDARG00000074335	boc	24: 21206243 ~ 21258945 (-)
ENSDARG00000077609	elfn2a	22: 15009168 ~ 15010688 (-)
ENSDARG00000077357	lrrc61	25: 25737386 ~ 25747469 (+)
ENSDARG00000076320	ano9a	25: 35155618 ~ 35182347 (-)
ENSDARG00000097208	NA	25: 30298377 ~ 30299662 (+)
--	sid4	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (2dpf)	head	baseline	2dpf, untreatment	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000077609

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences