Fish Single-cell RNA Database

GENE ID: ENSDARG00000093841

Symbol	Location	Gene type	Genome version	Species
zgc:152936	22: 25453334 ~ 25454523 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000093841 (zgc:152936), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000011929	plp1b	5: 23268121 ~ 23280098 (-)
ENSDARG00000115817	si:dkey-46g23.2	3: 3386221 ~ 3398383 (-)
ENSDARG00000078222	aatka	3: 51899578 ~ 51912019 (-)
ENSDARG00000020771	tnr	2: 35240485 ~ 35474115 (+)
ENSDARG00000068691	kctd4	9: 18876036 ~ 18877597 (-)
ENSDARG00000003903	hapln2	16: 29303971 ~ 29308947 (+)
ENSDARG00000042630	hebp2	20: 30894093 ~ 30901034 (-)
ENSDARG00000091409	zp2.6	20: 54304800 ~ 54306651 (+)
ENSDARG00000021916	vax1	17: 21432693 ~ 21441464 (-)
ENSDARG00000103732	plp1a	14: 14577246 ~ 14596699 (+)
ENSDARG00000039499	soul2	13: 27040887 ~ 27043334 (+)
ENSDARG00000025017	prdm8	13: 31292700 ~ 31296358 (-)
ENSDARG00000104442	aatkb	12: 35702809 ~ 35787801 (-)
ENSDARG00000089444	omgb	15: 30917282 ~ 30921559 (+)
ENSDARG00000086573	omga	10: 37334270 ~ 37337579 (-)
ENSDARG00000093841	zgc:152936	22: 25453334 ~ 25454523 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	NA	NA	NA
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000093841

EXPRESSION

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