Fish Single-cell RNA Database

GENE ID: ENSDARG00000017314

Symbol	Location	Gene type	Genome version	Species
cela1.6	22: 7439186 ~ 7447391 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000017314 (cela1.6), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000074547	si:ch211-240l19.8	4: 8029968 ~ 8030583 (-)
ENSDARG00000090428	ctrb1	7: 35075847 ~ 35079299 (+)
ENSDARG00000024503	c6ast3	7: 38642114 ~ 38644560 (-)
ENSDARG00000007276	ela3l	5: 26111596 ~ 26118855 (-)
ENSDARG00000012539	dnase1	3: 27778975 ~ 27784457 (-)
ENSDARG00000013856	amy2a	2: 15612755 ~ 15626972 (+)
ENSDARG00000018263	pdia2	1: 9954489 ~ 9966195 (+)
ENSDARG00000042993	prss1	16: 25080764 ~ 25085327 (-)
ENSDARG00000056765	ela2l	8: 21366771 ~ 21372485 (-)
ENSDARG00000056744	ela2	8: 21376290 ~ 21381734 (+)
ENSDARG00000031929	stard14	14: 33270387 ~ 33278084 (-)
ENSDARG00000097718	stard10	15: 47746176 ~ 47774711 (+)
ENSDARG00000041645	sb:cb37	15: 21137046 ~ 21155657 (-)
ENSDARG00000068680	ctrl	15: 37820258 ~ 37829160 (-)
ENSDARG00000029822	cel.2	21: 11385031 ~ 11393979 (+)
ENSDARG00000017490	cel.1	21: 11401247 ~ 11411365 (+)
ENSDARG00000004296	ambp	10: 10801564 ~ 10824286 (+)
ENSDARG00000045442	cpb1	24: 4755391 ~ 4765740 (-)
ENSDARG00000022372	kng1	22: 36839080 ~ 36876133 (-)
ENSDARG00000017314	cela1.6	22: 7439186 ~ 7447391 (+)
ENSDARG00000043168	cela1.5	22: 7497319 ~ 7508894 (+)
ENSDARG00000070892	si:ch211-262h13.5	22: 38812549 ~ 38819603 (-)
ENSDARG00000030915	cpa1	25: 18448186 ~ 18454016 (-)
ENSDARG00000021339	cpa5	25: 18459924 ~ 18470695 (-)
ENSDARG00000043722	cpa4	25: 16582172 ~ 16589461 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	Bi-hormonal endocrine cells (cluster: 2)	potential marker	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas exocrine cells (cluster: 4) Pancreas exocrine cells (cluster: 8)	potential marker potential marker	NA NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (1.25dpf)	embryo	baseline	1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000017314

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences