Fish Single-cell RNA Database

GENE ID: ENSDARG00000078962

Symbol	Location	Gene type	Genome version	Species
duox2	25: 31944165 ~ 31953516 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000078962 (duox2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000012002	slc38a7	7: 51795667 ~ 51816589 (+)
ENSDARG00000005821	ncf2	7: 41329748 ~ 41338923 (-)
ENSDARG00000056047	noxa1	5: 29142797 ~ 29152464 (-)
ENSDARG00000068650	fam214b	5: 19021786 ~ 19052497 (-)
ENSDARG00000100524	abca3b	3: 12593558 ~ 12699905 (+)
ENSDARG00000046140	zgc:112038	3: 21200763 ~ 21218133 (+)
ENSDARG00000061858	zgc:153968	3: 21225750 ~ 21230668 (+)
ENSDARG00000070061	gfer	3: 40162399 ~ 40168482 (+)
ENSDARG00000100419	ints1	3: 42999277 ~ 43060971 (+)
ENSDARG00000041294	noxo1a	3: 62161184 ~ 62169060 (+)
ENSDARG00000053155	alg3	2: 44972720 ~ 44981344 (+)
ENSDARG00000055559	chrna6	1: 22481723 ~ 22512136 (-)
ENSDARG00000089032	si:ch211-154o6.2	16: 21673723 ~ 21692024 (-)
ENSDARG00000007179	sash1a	20: 31428819 ~ 31743817 (-)
ENSDARG00000005392	slc5a5	8: 13364950 ~ 13382351 (+)
ENSDARG00000058853	sash1b	17: 6985428 ~ 7060477 (-)
ENSDARG00000087574	nox1	14: 41345175 ~ 41361847 (+)
ENSDARG00000003965	tlx1	13: 28267997 ~ 28272299 (-)
ENSDARG00000039569	emx1	13: 15004398 ~ 15010683 (+)
ENSDARG00000074779	alms1	13: 9368619 ~ 9406159 (+)
ENSDARG00000018283	cyba	18: 31073265 ~ 31075619 (+)
ENSDARG00000001015	znf384l	19: 6960388 ~ 6988866 (-)
ENSDARG00000092305	poldip2	15: 24676905 ~ 24690260 (+)
ENSDARG00000076056	NA	23: 39774931 ~ 39784368 (-)
ENSDARG00000056615	cybb	11: 29795155 ~ 29818866 (-)
ENSDARG00000079773	nox5	25: 7927349 ~ 7946732 (-)
ENSDARG00000078962	duox2	25: 31944165 ~ 31953516 (-)
ENSDARG00000062632	duox	25: 31958911 ~ 32018990 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	Enveloping layer cells (cluster: 5)	potential marker	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	Epithelialized macrophages (cluster: 2) Proliferating cells (cluster: 5)	potential marker potential marker	NA NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	Thyrocytes (cluster: 7)	potential marker	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	Thyrocytes (cluster: 12)	potential marker	NA
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000078962

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences