|
Dataset ID |
Tissue / Organ |
Experiment type |
Sample |
Cell type |
Marker class |
Evidence |
|
GSE150498 (untreated ctrl) |
intestine |
baseline |
6dpf, untreated ctrl |
Hepatocytes (cluster: 9)
|
potential marker
|
NA
|
|
GSE151354 (wild type) |
cartilage |
baseline |
21dpf, wild type |
|
|
|
|
GSE151354 (nkx3.2 mutant) |
cartilage |
growth |
21dpf, nkx3.2 mutant |
|
|
|
|
GSE130526 (fin) |
dorsal and anal fin |
baseline |
adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry |
|
|
|
|
GSE106587 (WT) |
embryo |
baseline |
12hpf, 6 somites, wild-type TLAB embryo |
|
|
|
|
GSE106587 (MZoep mutant) |
embryo |
baseline |
12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo |
|
|
|
|
GSE126647 (control) |
embryo |
baseline |
1.17dpf, control nkx2.5:ZsYellow+ cells |
|
|
|
|
GSE126647 (Pbx4-depleted) |
embryo |
growth |
1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells |
|
|
|
|
GSE158142 (12hpf) |
head |
baseline |
12hpf, 6 somites, untreatment |
|
|
|
|
GSE158142 (16hpf) |
head |
baseline |
16hpf, 14 somites, untreatment |
|
|
|
|
GSE158142 (24hpf) |
head |
baseline |
24hpf, untreatment |
|
|
|
|
GSE150498 (DSS treated) |
intestine |
disease |
6dpf, DSS treated |
|
|
|
|
GSE150498 (wildtype, untreated) |
intestine |
baseline |
6dpf, wildtype, untreated |
|
|
|
|
GSE150498 (wildtype, 1X DSS) |
intestine |
disease |
6dpf, wildtype, 1X DSS |
|
|
|
|
GSE150498 (nod2-|-, 1X DSS) |
intestine |
disease |
6dpf, nod2-/-, 1X DSS |
|
|
|
|
GSE150498 (wildtype, 2X DSS+BZA) |
intestine |
disease |
6dpf, wildtype, 2X DSS+BZA |
|
|
|
|
GSE150498 (nod2-|-, 2X DSS) |
intestine |
disease |
6dpf, nod2-/-, 2X DSS |
|
|
|
|
GSE150498 (nod2-|-, 2X DSS+BZA) |
intestine |
disease |
6dpf, nod2-/-, 2X DSS+BZA |
|
|
|
|
GSE137784 (HCC, HepABC) |
liver |
disease |
6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC |
|
|
|
|
GSE137784 (HCC, CreLox) |
liver |
disease |
6mpf, male, isolated from the zebrafish without HCC |
|
|
|
|
GSE137784 (no HCC) |
liver |
baseline |
6mpf, male, isolated from the CreLox zebrafish with HCC |
|
|
|
|
GSE123241 (fgf3 mutants) |
neuromast |
regeneration |
5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory |
|
|
|
|
GSE148591 (3mpf) |
pituitary |
transplant |
3mpf, graft transplantation during early embryogenesis |
|
|
|
|
GSE122680 (24hpf) |
retina |
baseline |
24hpf, WT, untreatment |
|
|
|
|
GSE122680 (1.5dpf) |
retina |
baseline |
1.5dpf, WT, untreatment |
|
|
|
|
GSE122680 (3dpf) |
retina |
baseline |
3dpf, WT, untreatment |
|
|
|
|
GSE122680 (14dpf) |
retina |
baseline |
14dpf, WT, untreatment |
|
|
|
|
GSE131136 (all) |
trunk, skin |
baseline |
5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
|
|
|