| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment | NA | NA | NA | |
| GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | NA | NA | NA | |
| GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | NA | NA | NA | |
| GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | NA | NA | NA | |
| GSE158849 (labeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (labeled) | NA | NA | NA | |
| GSE158849 (unlabeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (unlabeled) | NA | NA | NA | |
| GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | NA | NA | NA | |
| GSE106587 (MZoep mutant) | embryo | baseline | 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo | NA | NA | NA | |
| GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | NA | NA | NA | |
| GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | NA | NA | NA | |
| GSE161712 (M. marinum) | granulomas | disease | adult, infected with bacteria of M. marinum | NA | NA | NA | |
| GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | NA | NA | NA | |
| GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | NA | NA | NA | |
| GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | NA | NA | NA | |
| GSE158142 (3dpf) | head | baseline | 3dpf, untreatment | NA | NA | NA | |
| GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | NA | NA | NA | |
| GSE150498 (nod2-|-, untreated) | intestine | disease | 6dpf, nod2-/-, untreated | NA | NA | NA | |
| GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | NA | NA | NA | |
| GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | NA | NA | NA | |
| GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | NA | NA | NA | |
| GSE150498 (nod2-|-, 2X DSS+BZA) | intestine | disease | 6dpf, nod2-/-, 2X DSS+BZA | NA | NA | NA | |
| GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | NA | NA | NA | |
| GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment | NA | NA | NA | |
| GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | NA | NA | NA | |
| GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | NA | NA | NA | |
| GSE159709 (melanoma) | tumor | disease | adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells | NA | NA | NA | |
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
| GSE158099 (WT) | whole body | baseline | 6dpf, cd41:GFPlow-WT | NA | NA | NA | |
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 6dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
| GSE158099 (WT) | whole body | baseline | 10dpf, cd41:GFPlow-WT | NA | NA | NA | |
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 10dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
| GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | NA | NA | NA | |
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
| GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA |