Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
nod1 | 16: 53710416 ~ 53734405 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000067672 | card9 | 5: 51156808 ~ 51166025 (-) |
ENSDARG00000016065 | tlr3 | 1: 17892944 ~ 17898227 (+) |
ENSDARG00000037758 | tlr2 | 1: 8984068 ~ 8988504 (+) |
ENSDARG00000040076 | pycard | 16: 41984032 ~ 41990421 (-) |
ENSDARG00000008165 | caspa | 16: 41993551 ~ 42004544 (-) |
ENSDARG00000075819 | arhgef2 | 16: 6864244 ~ 6933178 (+) |
ENSDARG00000036308 | nod1 | 16: 53710416 ~ 53734405 (+) |
ENSDARG00000052322 | tlr5b | 20: 51466046 ~ 51476849 (+) |
ENSDARG00000044415 | tlr5a | 20: 51478939 ~ 51482591 (+) |
ENSDARG00000041960 | si:ch211-173a9.6 | 17: 52581012 ~ 52587598 (-) |
ENSDARG00000087625 | si:ch211-173a9.6 | 17: 52589913 ~ 52595932 (-) |
ENSDARG00000069733 | mavs | 13: 15182149 ~ 15213869 (+) |
ENSDARG00000022048 | tlr4bb | 13: 18523661 ~ 18528862 (+) |
ENSDARG00000068382 | pglyrp5 | 18: 40902636 ~ 40905901 (-) |
ENSDARG00000010514 | cxcr5 | 18: 43891051 ~ 43894087 (+) |
ENSDARG00000040380 | arhgef1a | 19: 11039517 ~ 11106315 (-) |
ENSDARG00000076110 | nwd1 | 11: 7214353 ~ 7246987 (+) |
ENSDARG00000074322 | si:ch211-194m7.3 | 25: 13191391 ~ 13194926 (+) |
ENSDARG00000062632 | duox | 25: 31958911 ~ 32018990 (+) |
ENSDARG00000059741 | NA | -- |
ENSDARG00000000384 | NA | -- |
ENSDARG00000020608 | NA | -- |
ENSDARG00000021660 | NA | -- |
ENSDARG00000033713 | NA | -- |
ENSDARG00000057430 | NA | -- |
ENSDARG00000070588 | NA | -- |
ENSDARG00000092412 | NA | -- |
ENSDARG00000007053 | NA | -- |
ENSDARG00000096466 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE115140 (cancer) | tumor | ST | cancer | adult, the ST sample sections from zebrafish melanoma tumors were obtained by sectioning the entire tumor with its surrounding | GSM3167486
|
GSE115140 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 |