Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
atoh7 | 13: 25449681 ~ 25450725 (+) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000053499 | isl2b | 7: 29992889 ~ 29997444 (+) |
ENSDARG00000035508 | barhl1a | 5: 29746355 ~ 29750377 (-) |
ENSDARG00000010591 | foxn4 | 5: 19385503 ~ 19400166 (-) |
ENSDARG00000004023 | isl1 | 5: 40728613 ~ 40734045 (-) |
ENSDARG00000014420 | elavl3 | 3: 46800190 ~ 46818001 (-) |
ENSDARG00000005559 | pou4f1 | 6: 4539953 ~ 4543005 (+) |
ENSDARG00000040321 | rx2 | 2: 55833425 ~ 55861351 (-) |
ENSDARG00000005915 | tcf3a | 2: 57310523 ~ 57379216 (-) |
ENSDARG00000069737 | pou4f2 | 1: 36436936 ~ 36440301 (+) |
ENSDARG00000006206 | pou4f3 | 9: 54290896 ~ 54292162 (+) |
ENSDARG00000056292 | vsx1 | 17: 21063403 ~ 21066105 (-) |
ENSDARG00000005574 | vsx2 | 17: 31652640 ~ 31659670 (-) |
ENSDARG00000025187 | six6a | 13: 31583034 ~ 31606247 (+) |
ENSDARG00000058008 | six3a | 13: 10258007 ~ 10261383 (-) |
ENSDARG00000069552 | atoh7 | 13: 25449681 ~ 25450725 (+) |
ENSDARG00000016704 | pbld | 13: 22839821 ~ 22843805 (-) |
ENSDARG00000074119 | frmpd2 | 12: 2522642 ~ 2568460 (+) |
ENSDARG00000054879 | six3b | 12: 25600685 ~ 25603341 (+) |
ENSDARG00000043483 | otx5 | 15: 47903864 ~ 47909281 (+) |
ENSDARG00000032963 | her12 | 23: 21444922 ~ 21446985 (-) |
ENSDARG00000052893 | rx3 | 21: 10756154 ~ 10759223 (+) |
ENSDARG00000044924 | gdf11 | 11: 15613218 ~ 15756385 (+) |
ENSDARG00000043542 | zpr1 | 10: 29820172 ~ 29831944 (-) |
ENSDARG00000009862 | dcps | 10: 39283985 ~ 39294725 (+) |
ENSDARG00000071684 | rx1 | 22: 4997784 ~ 5006801 (-) |
ENSDARG00000045930 | rbpms2a | 25: 6122823 ~ 6153077 (+) |
ENSDARG00000015775 | NA | -- |
ENSDARG00000045045 | NA | -- |
ENSDARG00000070129 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE159709 (Visium-sample A) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838131
|
GSE159709 | |
GSE159709 (Visium-sample B) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838132
|
GSE159709 |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 |