Fish Spatial Expression Database

GENE ID: ENSDARG00000045268

Symbol	Location	Gene type	Genome version	Species
tectb	12: 31476169 ~ 31484677 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000045268 (tectb), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000056781	zanl	7: 26326462 ~ 26365420 (+)
ENSDARG00000068460	otog	7: 39463050 ~ 39537292 (-)
ENSDARG00000076830	si:dkey-65b12.6	5: 41826958 ~ 41845116 (-)
ENSDARG00000004322	ush1ga	3: 56882832 ~ 56896702 (-)
ENSDARG00000001771	otol1a	2: 6303639 ~ 6316167 (+)
ENSDARG00000001721	oc90	2: 42942552 ~ 42960353 (-)
ENSDARG00000040306	otomp	2: 41504752 ~ 41518340 (-)
ENSDARG00000076981	zgc:198329	16: 11558868 ~ 11569729 (+)
ENSDARG00000095772	si:dkey-11o1.2	16: 11573471 ~ 11578407 (+)
ENSDARG00000093279	si:dkey-11o1.3	16: 11603096 ~ 11621551 (+)
ENSDARG00000078177	cxcr3.1	16: 11623956 ~ 11642009 (+)
ENSDARG00000095134	si:dkey-250k15.9	16: 11652591 ~ 11653478 (+)
ENSDARG00000092520	si:dkey-250k15.10	16: 11660839 ~ 11680970 (+)
ENSDARG00000095048	si:dkey-250k15.7	16: 11683548 ~ 11709759 (+)
ENSDARG00000080675	si:dkey-71b5.7	16: 21946091 ~ 22006996 (-)
ENSDARG00000024032	coch	17: 28743661 ~ 28749640 (-)
ENSDARG00000088750	otogl	18: 6155258 ~ 6265533 (+)
ENSDARG00000057498	habp2	12: 31713239 ~ 31720066 (+)
ENSDARG00000061020	ccdc186	12: 30367079 ~ 30422456 (+)
ENSDARG00000079227	plekhs1	12: 30517386 ~ 30523229 (-)
ENSDARG00000089581	nhlrc2	12: 30458409 ~ 30500803 (-)
ENSDARG00000070041	zgc:153920	12: 30528623 ~ 30540755 (-)
ENSDARG00000091768	dclre1a	12: 30501044 ~ 30516095 (+)
ENSDARG00000090526	zgc:158404	12: 30540911 ~ 30549022 (-)
ENSDARG00000096786	si:ch211-28p3.3	12: 30550721 ~ 30558694 (-)
ENSDARG00000075721	zdhhc6	12: 31422557 ~ 31438582 (+)
ENSDARG00000045268	tectb	12: 31476169 ~ 31484677 (-)
ENSDARG00000116430	si:ch73-329n5.2	12: 44064620 ~ 44151296 (-)
ENSDARG00000035694	stm	19: 3137518 ~ 3167878 (-)
ENSDARG00000058960	otol1b	15: 1705167 ~ 1711472 (+)
ENSDARG00000044387	cldn2	21: 38002879 ~ 38009507 (+)
ENSDARG00000077610	hykk.1	22: 34691020 ~ 34698979 (+)
ENSDARG00000074341	hykk.2	22: 35505619 ~ 35531787 (+)
ENSDARG00000053776	NA	--
ENSDARG00000075257	NA	--
ENSDARG00000078845	NA	--
ENSDARG00000044447	NA	--
ENSDARG00000094778	NA	--

Expression

	Dataset ID	Tissue / organ	Technique	Experiment type	Sample description	Source dataset ID	Project ID
	GSE159709 (Visium-sample B)	tumor	Visium	cancer	adult, zebrafish with BRAFV600E-driven melanomas	GSM4838132	GSE159709

After clicking the magnifying glass button, the expression information will be displayed below.

	Dataset ID	Tissue / organ	Technique	Experiment type	Sample description	Source dataset ID	Project ID
	GSE120581 (tail replicate1)	tail	Geo-seq	baseline	late embryo, 2.3dpf, the tails of embryos, untreatment	GSM3402086-GSM3402121	GSE120581
	GSE120581 (tail replicate2)	tail	Geo-seq	baseline	late embryo, 2.3dpf, the tails of embryos, untreatment	GSM3402122-GSM3402157	GSE120581

After clicking the magnifying glass button, the expression information will be displayed below.

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

one-cell stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE158849 (embryo replicate1)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812175	GSE158849
GSE158849 (embryo replicate2)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812176	GSE158849
GSE158849 (embryo replicate3)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812177	GSE158849

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350

adult

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE74652 (7 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury	GSM1924888	GSE74652

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000045268

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.