| Symbol | Location | Gene type | Genome version | Species |
|---|---|---|---|---|
| msh5 | 15: 39934295 ~ 39955785 (-) | protein_coding | GRCz11 | Danio rerio |
| Gene ID | Symbol | Location |
|---|---|---|
| ENSDARG00000079470 | cdk17 | 4: 7718854 ~ 7811925 (-) |
| ENSDARG00000035187 | abl1 | 5: 72145468 ~ 72168783 (+) |
| ENSDARG00000051914 | slc14a2 | 5: 52167986 ~ 52177850 (+) |
| ENSDARG00000093723 | rnf212b | 2: 38277275 ~ 38282079 (-) |
| ENSDARG00000074451 | mnd1 | 1: 25178106 ~ 25216235 (+) |
| ENSDARG00000068255 | nanos3 | 1: 55247370 ~ 55248496 (-) |
| ENSDARG00000000476 | pms1 | 9: 40948569 ~ 41025062 (-) |
| ENSDARG00000040254 | hormad1 | 16: 29551023 ~ 29557338 (-) |
| ENSDARG00000025043 | trip13 | 16: 52966812 ~ 52991487 (+) |
| ENSDARG00000017928 | xrcc3 | 20: 20896622 ~ 20901558 (-) |
| ENSDARG00000032072 | cdk16 | 8: 8362441 ~ 8446668 (-) |
| ENSDARG00000075632 | rad9b | 8: 4407994 ~ 4431985 (-) |
| ENSDARG00000075826 | msh4 | 17: 43889371 ~ 43920385 (+) |
| ENSDARG00000090319 | rnf212 | 14: 17397534 ~ 17416730 (+) |
| ENSDARG00000078995 | tex11 | 14: 33049579 ~ 33068736 (+) |
| ENSDARG00000025948 | mlh1 | 13: 42602406 ~ 42617639 (+) |
| ENSDARG00000095394 | si:ch1073-75f15.2 | 18: 1154189 ~ 1161814 (+) |
| ENSDARG00000069781 | rec114 | 18: 1145571 ~ 1154477 (+) |
| ENSDARG00000075672 | pms2 | 12: 17603528 ~ 17619524 (+) |
| ENSDARG00000004472 | atat1 | 19: 27479563 ~ 27515651 (+) |
| ENSDARG00000077479 | msh5 | 15: 39934295 ~ 39955785 (-) |
| ENSDARG00000056334 | mlh3 | 23: 24589633 ~ 24598877 (+) |
| ENSDARG00000013837 | spo11 | 23: 6544453 ~ 6574123 (+) |
| ENSDARG00000088956 | NA | -- |
| ENSDARG00000018434 | NA | -- |
| ENSDARG00000068922 | NA | -- |
| Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|---|
| GSE159709 (Visium-sample C) | tumor | Visium | cancer | adult, zebrafish with BRAFV600E-driven melanomas | GSM4838133
|
GSE159709 |
| Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|---|
| GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
| GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
| GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
| GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
| GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
| GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
| GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
| GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
| GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
| GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
| GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
| GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
| GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
| GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
| GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
| Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
|---|---|---|---|---|---|---|
| GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
| GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
| GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
| GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 |