Fish Spatial Expression Database

GENE ID: ENSDARG00000000102

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000000102 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000090615	cd59	7: 38695719 ~ 38698664 (-)
ENSDARG00000069660	chrnb1	7: 22543963 ~ 22580026 (+)
ENSDARG00000022532	chrnb1l	7: 22585447 ~ 22608687 (+)
ENSDARG00000031796	ache	7: 26077153 ~ 26087807 (-)
ENSDARG00000034307	chrne	5: 38440099 ~ 38451082 (-)
ENSDARG00000068624	sptbn4a	5: 22465086 ~ 22501663 (-)
ENSDARG00000009021	chrna1	6: 10812337 ~ 10828923 (-)
ENSDARG00000087071	chrna4a	6: 58508420 ~ 58521774 (+)
ENSDARG00000073869	pdzrn3b	6: 44243070 ~ 44402358 (-)
ENSDARG00000009488	gipc2	2: 9560740 ~ 9590850 (+)
ENSDARG00000086647	chrng	2: 45081489 ~ 45097743 (+)
ENSDARG00000060236	dok7	1: 41142881 ~ 41192206 (-)
ENSDARG00000061830	prss12	1: 20069535 ~ 20141844 (+)
ENSDARG00000019692	colq	16: 20198064 ~ 20238985 (+)
ENSDARG00000001971	cthrc1b	16: 47454586 ~ 47483142 (-)
ENSDARG00000057025	chrna2b	20: 19793620 ~ 19824515 (+)
ENSDARG00000030154	pak7	20: 54685143 ~ 54744600 (+)
ENSDARG00000063068	syne1b	17: 7844927 ~ 8173380 (-)
ENSDARG00000006602	chrna2a	17: 6079881 ~ 6101820 (+)
ENSDARG00000032617	fgfrl1a	14: 17442913 ~ 17563773 (-)
ENSDARG00000006456	pdgfrl	14: 30359124 ~ 30366196 (-)
ENSDARG00000041133	rapsn	18: 20494413 ~ 20511015 (+)
ENSDARG00000074216	wu:fc38h03	19: 19412692 ~ 19432928 (+)
ENSDARG00000073757	pdzrn3a	23: 10828716 ~ 10914275 (-)
ENSDARG00000079388	agrn	23: 23485858 ~ 23914687 (+)
ENSDARG00000095919	si:ch73-236e11.2	23: 29908348 ~ 29938201 (+)
ENSDARG00000056181	ncam1a	21: 23338059 ~ 23746947 (-)
ENSDARG00000070724	chrna4b	11: 12982260 ~ 12998400 (-)
ENSDARG00000014796	wnt11	10: 32104305 ~ 32123204 (+)
ENSDARG00000019342	chrnd	24: 25683071 ~ 25691020 (-)
ENSDARG00000034273	NA	--
ENSDARG00000000102	NA	--
ENSDARG00000017389	NA	--
ENSDARG00000076412	NA	--
ENSDARG00000088164	NA	--
ENSDARG00000058393	NA	--
ENSDARG00000059416	NA	--
ENSDARG00000090535	NA	--
ENSDARG00000091362	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE104057 (heart replicate1)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788518	GSE104057
GSE104057 (heart replicate2)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788519	GSE104057
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350
cvab004 (S2)	heart	baseline	late embryo, 1.08dpf, untreatment	S2	cvab004

adult

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE74652 (3 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury	GSM1924887	GSE74652
	GSE74652 (7 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury	GSM1924888	GSE74652

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000000102

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.