Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
-- | -- | -- | Zv9 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000002663 | optn | 4: 8016457 ~ 8027318 (+) |
ENSDARG00000054829 | pik3c3 | 7: 24593209 ~ 24621689 (-) |
ENSDARG00000008322 | ambra1a | 7: 39255781 ~ 39360325 (-) |
ENSDARG00000078890 | wdfy3 | 5: 40052930 ~ 40190949 (-) |
ENSDARG00000037871 | wipi2 | 3: 40821657 ~ 40837218 (-) |
ENSDARG00000078772 | nbr1b | 3: 32933663 ~ 32952050 (+) |
ENSDARG00000052104 | atg4b | 6: 27090800 ~ 27105013 (+) |
ENSDARG00000009350 | atg3 | 6: 7109954 ~ 7123210 (-) |
ENSDARG00000044373 | atg4c | 6: 32300018 ~ 32315494 (-) |
ENSDARG00000016255 | chmp4ba | 6: 49901465 ~ 49920320 (+) |
ENSDARG00000079059 | retreg1 | 2: 31781843 ~ 31800521 (-) |
ENSDARG00000040822 | fundc1 | 9: 33783549 ~ 33785200 (-) |
ENSDARG00000023396 | atg5 | 16: 7380463 ~ 7416532 (+) |
ENSDARG00000060469 | pik3r4 | 16: 36721230 ~ 36748374 (-) |
ENSDARG00000056856 | tax1bp1b | 16: 20805322 ~ 20932896 (-) |
ENSDARG00000069545 | atg12 | 16: 13883872 ~ 13888705 (+) |
ENSDARG00000017321 | kdr | 20: 22220988 ~ 22277544 (+) |
ENSDARG00000041362 | chmp7 | 8: 51350453 ~ 51367298 (-) |
ENSDARG00000075333 | tbc1d25 | 8: 23658626 ~ 23670494 (+) |
ENSDARG00000007323 | chmp4bb | 8: 45361735 ~ 45375108 (+) |
ENSDARG00000002670 | NA | 17: 10748366 ~ 10766679 (+) |
ENSDARG00000014914 | lamp2 | 14: 33473804 ~ 33481618 (-) |
ENSDARG00000075014 | sqstm1 | 14: 16765992 ~ 16771405 (+) |
ENSDARG00000077009 | wdfy4 | 13: 30985047 ~ 31025505 (-) |
ENSDARG00000053979 | chmp2a | 12: 27027311 ~ 27031060 (-) |
ENSDARG00000052515 | calcoco2 | 12: 20641102 ~ 20652923 (+) |
ENSDARG00000079128 | becn1 | 12: 14556092 ~ 14703429 (+) |
ENSDARG00000077297 | nbr1a | 12: 27213733 ~ 27229858 (+) |
ENSDARG00000074481 | ulk1b | 21: 14839589 ~ 14878220 (-) |
ENSDARG00000014531 | atg4a | 21: 43485512 ~ 43510481 (+) |
ENSDARG00000028067 | bnip3lb | 10: 18911152 ~ 18935945 (+) |
ENSDARG00000023815 | uvrag | 10: 32264857 ~ 32494499 (-) |
ENSDARG00000007418 | chmp4c | 24: 11070110 ~ 11076400 (-) |
ENSDARG00000012738 | NA | -- |
ENSDARG00000020048 | NA | -- |
ENSDARG00000040149 | NA | -- |
ENSDARG00000045033 | NA | -- |
ENSDARG00000056689 | NA | -- |
ENSDARG00000057430 | NA | -- |
ENSDARG00000021202 | NA | -- |
ENSDARG00000078008 | NA | -- |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, A to V) | embryo | baseline | shield stage, intact embryo, sectioned from animal to vegetal pole | GSM1448795
|
GSE59873 | |
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, V to A, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole, replicate | GSM1448797
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, V to D) | embryo | baseline | shield stage, intact embryo, sectioned from ventral to dorsal end | GSM1448800
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, A to P, replicate) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate | GSM1448804
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, L to R) | embryo | baseline | 10 somite stage, intact embryo, sectioned from left to right | GSM1448808
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, P to A) | embryo | baseline | 15 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448811
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate1) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788518
|
GSE104057 | |
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE104057 (heart replicate3) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788520
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.17dpf trunk) | embryo | baseline | late embryo, 1.17dpf, trunk, untreatment | GSM3672148
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S4) | heart | baseline | late embryo, 1.08dpf, untreatment | S4 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 | |
GSE74652 (7 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury | GSM1924888
|
GSE74652 |