Fish Spatial Expression Database

GENE ID: ENSDARG00000074579

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000074579 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000078745	pnpla8	4: 13625892 ~ 13643616 (+)
ENSDARG00000069463	alox12	7: 26029672 ~ 26047946 (+)
ENSDARG00000035352	pafah1b2	5: 37966505 ~ 37971008 (+)
ENSDARG00000052148	ptgs1	5: 64900223 ~ 64946436 (+)
ENSDARG00000074466	gdpd3a	3: 26193592 ~ 26204867 (-)
ENSDARG00000039264	igfbp5a	6: 20910551 ~ 20918694 (+)
ENSDARG00000004539	ptgs2a	2: 20916497 ~ 20923864 (-)
ENSDARG00000070454	pla2g12a	1: 12061284 ~ 12064799 (-)
ENSDARG00000025348	igfbp5b	9: 46820636 ~ 46842179 (-)
ENSDARG00000011257	enpp2	16: 9609721 ~ 9662205 (+)
ENSDARG00000058047	pafah1b3	16: 11773395 ~ 11779661 (-)
ENSDARG00000091633	si:dkey-177p2.18	20: 27003558 ~ 27012959 (+)
ENSDARG00000003584	pla2g7	20: 35461736 ~ 35471079 (-)
ENSDARG00000094057	cyp2j20	20: 25597527 ~ 25615802 (+)
ENSDARG00000042980	cyp2p7	20: 25568694 ~ 25615727 (+)
ENSDARG00000042982	cyp2p8	20: 25575391 ~ 25580002 (+)
ENSDARG00000042732	tmem189	8: 28452738 ~ 28466870 (+)
ENSDARG00000096445	si:ch211-214p16.3	17: 25649939 ~ 25737452 (-)
ENSDARG00000093006	rarres3	14: 45559268 ~ 45564908 (+)
ENSDARG00000040469	enpp6	14: 4047215 ~ 4076480 (-)
ENSDARG00000057273	alox5a	13: 18128275 ~ 18174864 (-)
ENSDARG00000015662	pla2g12b	13: 4671698 ~ 4683595 (+)
ENSDARG00000011498	si:ch211-212o1.2	18: 18000695 ~ 18060544 (+)
ENSDARG00000006944	gdpd3b	12: 3893032 ~ 3904011 (-)
ENSDARG00000017261	gdpd1	15: 16886196 ~ 16894875 (+)
ENSDARG00000069823	proca1	15: 15445113 ~ 15449929 (-)
ENSDARG00000043085	alox5b.1	15: 942531 ~ 952891 (-)
ENSDARG00000043089	alox5b.2	15: 963292 ~ 976353 (+)
ENSDARG00000077474	pla2r1	11: 11021396 ~ 11109963 (+)
ENSDARG00000008948	pla2g3	10: 3520256 ~ 3532997 (+)
ENSDARG00000060921	pla2g6	22: 29087308 ~ 29130549 (+)
ENSDARG00000074579	NA	--
ENSDARG00000078718	NA	--
ENSDARG00000036713	NA	--
ENSDARG00000090495	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE104057 (heart replicate2)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788519	GSE104057
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

adult

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE74652 (3 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury	GSM1924887	GSE74652
	GSE74652 (7 days-post-cryoinjury)	heart	regeneration	adult, cryoinjured ventricle of the heart, extracted heart at 7 days-post-cryoinjury	GSM1924888	GSE74652

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000074579

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.