Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
tbx5a | 5: 72264192 ~ 72289648 (-) | protein_coding | GRCz11 | Danio rerio |
Gene ID | Symbol | Location |
---|---|---|
ENSDARG00000058702 | vax2 | 7: 8844285 ~ 8881514 (-) |
ENSDARG00000004023 | isl1 | 5: 40728613 ~ 40734045 (-) |
ENSDARG00000024894 | tbx5a | 5: 72264192 ~ 72289648 (-) |
ENSDARG00000077226 | smarca4a | 3: 19245804 ~ 19282525 (+) |
ENSDARG00000033971 | prrx1a | 2: 23165250 ~ 23172708 (-) |
ENSDARG00000008305 | hand2 | 1: 38193147 ~ 38195012 (-) |
ENSDARG00000059274 | hoxd9a | 9: 1964005 ~ 1965727 (-) |
ENSDARG00000057859 | hoxd10a | 9: 1967707 ~ 1970071 (-) |
ENSDARG00000090637 | myh6 | 20: 53577502 ~ 53583436 (+) |
ENSDARG00000021232 | nkx2.7 | 8: 50284859 ~ 50287949 (-) |
ENSDARG00000052960 | nppa | 8: 48613040 ~ 48617664 (+) |
ENSDARG00000018004 | nkx2.5 | 14: 24241241 ~ 24244034 (+) |
ENSDARG00000036194 | pitx2 | 14: 36218072 ~ 36231211 (+) |
ENSDARG00000039095 | nkx2.3 | 13: 40409215 ~ 40411917 (-) |
ENSDARG00000068401 | yap1 | 18: 37283765 ~ 37355666 (-) |
ENSDARG00000061685 | hcn4 | 18: 1004814 ~ 1143998 (-) |
ENSDARG00000062634 | kat2b | 19: 20724347 ~ 20755146 (+) |
ENSDARG00000075713 | shox2 | 15: 2182103 ~ 2188422 (-) |
ENSDARG00000036869 | tcf21 | 23: 31554269 ~ 31555696 (-) |
ENSDARG00000092809 | hoxc9a | 23: 36095260 ~ 36097488 (+) |
ENSDARG00000017821 | gata5 | 23: 7379728 ~ 7391028 (+) |
ENSDARG00000044485 | sall4 | 23: 38940700 ~ 38952596 (+) |
ENSDARG00000030932 | fgf10a | 21: 19635486 ~ 19683168 (+) |
ENSDARG00000029764 | mef2ca | 10: 43544814 ~ 43655449 (-) |
ENSDARG00000067719 | wwtr1 | 22: 38049130 ~ 38114599 (+) |
ENSDARG00000042785 | NA | -- |
ENSDARG00000008350 | NA | -- |
ENSDARG00000030638 | NA | -- |
ENSDARG00000035831 | NA | -- |
ENSDARG00000076267 | NA | -- |
ENSDARG00000035759 | NA | -- |
ENSDARG00000045242 | NA | -- |
ENSDARG00000076615 | NA | -- |
Dataset ID | Tissue / organ | Technique | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|---|
GSE120581 (tail replicate1) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402086-GSM3402121
|
GSE120581 | |
GSE120581 (tail replicate2) | tail | Geo-seq | baseline | late embryo, 2.3dpf, the tails of embryos, untreatment | GSM3402122-GSM3402157
|
GSE120581 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE158849 (embryo replicate1) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812175
|
GSE158849 | |
GSE158849 (embryo replicate2) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812176
|
GSE158849 | |
GSE158849 (embryo replicate3) | embryo | baseline | one-cell stage, 0.3hpf, untreatment | GSM4812177
|
GSE158849 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (shield, V to A) | embryo | baseline | shield stage, intact embryo, sectioned from vegetal to animal pole | GSM1448796
|
GSE59873 | |
GSE59873 (shield, L to R) | embryo | baseline | shield stage, intact embryo, sectioned from left to right | GSM1448798
|
GSE59873 | |
GSE59873 (shield, R to L) | embryo | baseline | shield stage, intact embryo, sectioned from right to left | GSM1448799
|
GSE59873 | |
GSE59873 (shield, D to V) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end | GSM1448801
|
GSE59873 | |
GSE59873 (shield, D to V, replicate) | embryo | baseline | shield stage, intact embryo, sectioned from dorsal to ventral end, replicate | GSM1448802
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (10 somite, A to P) | embryo | baseline | 10 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448803
|
GSE59873 | |
GSE59873 (10 somite, P to A) | embryo | baseline | 10 somite stage, intact embryo, sectioned from posterior to anterior end | GSM1448805
|
GSE59873 | |
GSE59873 (10 somite, V to D) | embryo | baseline | 10 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448806
|
GSE59873 | |
GSE59873 (10 somite, D to V) | embryo | baseline | 10 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448807
|
GSE59873 | |
GSE59873 (10 somite, R to L) | embryo | baseline | 10 somite stage, intact embryo, sectioned from right to left | GSM1448809
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (15 somite, A to P) | embryo | baseline | 15 somite stage, intact embryo, sectioned from anterior to posterior end | GSM1448810
|
GSE59873 | |
GSE59873 (15 somite, V to D) | embryo | baseline | 15 somite stage, intact embryo, sectioned from ventral to dorsal end | GSM1448812
|
GSE59873 | |
GSE59873 (15 somite, D to V) | embryo | baseline | 15 somite stage, intact embryo, sectioned from dorsal to ventral end | GSM1448813
|
GSE59873 | |
GSE59873 (15 somite, L to R) | embryo | baseline | 15 somite stage, intact embryo, sectioned from left to right | GSM1448814
|
GSE59873 | |
GSE59873 (15 somite, R to L) | embryo | baseline | 15 somite stage, intact embryo, sectioned from right to left | GSM1448815
|
GSE59873 | |
GSE59873 (15 somite, H to T) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned head to tail | GSM1448816
|
GSE59873 | |
GSE59873 (15 somite, T to H) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head | GSM1448817
|
GSE59873 | |
GSE59873 (15 somite, T to H, replicate) | embryo | baseline | 15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate | GSM1448819
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE59873 (18 somite, T to H) | embryo | baseline | 18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head | GSM1448820
|
GSE59873 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE104057 (heart replicate1) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788518
|
GSE104057 | |
GSE104057 (heart replicate2) | heart | baseline | late embryo, 2dpf, isolated embryonic heart | GSM2788519
|
GSE104057 | |
GSE128350 (1.67dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672145
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate1) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672146
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672147
|
GSE128350 | |
GSE128350 (1.67dpf trunk) | embryo | baseline | late embryo, 1.67dpf, trunk, untreatment | GSM3672149
|
GSE128350 | |
GSE128350 (1.67dpf whole embryo replicate2) | embryo | baseline | late embryo, 1.67dpf, whole embryo, untreatment | GSM3672157
|
GSE128350 | |
GSE128350 (1.17dpf whole embryo replicate3) | embryo | baseline | late embryo, 1.17dpf, whole embryo, untreatment | GSM3672158
|
GSE128350 | |
cvab004 (S2) | heart | baseline | late embryo, 1.08dpf, untreatment | S2 | cvab004 | |
cvab004 (S3) | heart | baseline | late embryo, 1.08dpf, untreatment | S3 | cvab004 | |
cvab004 (S4) | heart | baseline | late embryo, 1.08dpf, untreatment | S4 | cvab004 | |
cvab004 (S5) | heart | baseline | late embryo, 1.08dpf, untreatment | S5 | cvab004 |
Dataset ID | Tissue / organ | Experiment type | Sample description | Source dataset ID | Project ID | |
---|---|---|---|---|---|---|
GSE74652 (3 days-post-cryoinjury) | heart | regeneration | adult, cryoinjured ventricle of the heart, extracted heart at 3 days-post-cryoinjury | GSM1924887
|
GSE74652 |