Fish Spatial Expression Database

GENE ID: ENSDARG00000021202

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000021202 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000052082	gabarapb	7: 69470142 ~ 69478567 (+)
ENSDARG00000051888	ist1	7: 56472568 ~ 56484798 (+)
ENSDARG00000091619	mvb12ba	5: 5171254 ~ 5243111 (-)
ENSDARG00000035557	gabarapa	5: 24059598 ~ 24061806 (+)
ENSDARG00000097055	si:ch211-284f22.3	5: 59116068 ~ 59202264 (+)
ENSDARG00000039319	vps37b	5: 27999886 ~ 28016805 (-)
ENSDARG00000055743	ankrd54	3: 26035550 ~ 26044759 (+)
ENSDARG00000097451	chmp6a	3: 51660158 ~ 51677582 (+)
ENSDARG00000016255	chmp4ba	6: 49901465 ~ 49920320 (+)
ENSDARG00000069175	vps4b	2: 13255986 ~ 13333991 (-)
ENSDARG00000095837	si:dkey-185p13.1	2: 13298051 ~ 13333932 (-)
ENSDARG00000014302	brinp2	2: 34380982 ~ 34555945 (-)
ENSDARG00000077544	toe1	2: 27379861 ~ 27385934 (-)
ENSDARG00000002190	chmp2bb	1: 33558555 ~ 33569245 (+)
ENSDARG00000031836	vps37c	1: 44949909 ~ 44963259 (+)
ENSDARG00000060243	enox1	9: 18310228 ~ 18568927 (-)
ENSDARG00000013732	vta1	20: 37300296 ~ 37379578 (+)
ENSDARG00000041362	chmp7	8: 51350453 ~ 51367298 (-)
ENSDARG00000007323	chmp4bb	8: 45361735 ~ 45375108 (+)
ENSDARG00000038064	chmp3	17: 43468732 ~ 43476280 (+)
ENSDARG00000071259	fbxo34	17: 10783599 ~ 10813885 (-)
ENSDARG00000090895	kansl1a	12: 4686145 ~ 4725660 (+)
ENSDARG00000059079	vps25	12: 3714076 ~ 3721957 (-)
ENSDARG00000053979	chmp2a	12: 27027311 ~ 27031060 (-)
ENSDARG00000058076	snf8	12: 20652957 ~ 20658285 (-)
ENSDARG00000033182	arl4ab	19: 31339305 ~ 31341850 (-)
ENSDARG00000027403	zgpat	11: 12860260 ~ 12875188 (+)
ENSDARG00000057021	vps36	10: 24643079 ~ 24680425 (+)
ENSDARG00000007418	chmp4c	24: 11070110 ~ 11076400 (-)
ENSDARG00000027200	gabarapl2	25: 34835553 ~ 34845302 (-)
ENSDARG00000040854	tsg101a	25: 25132703 ~ 25142387 (-)
ENSDARG00000030114	vps4a	25: 34938317 ~ 34948058 (+)
ENSDARG00000001285	NA	--
ENSDARG00000009802	NA	--
ENSDARG00000020048	NA	--
ENSDARG00000028391	NA	--
ENSDARG00000041900	NA	--
ENSDARG00000042558	NA	--
ENSDARG00000045949	NA	--
ENSDARG00000021202	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE104057 (heart replicate1)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788518	GSE104057
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000021202

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.