Fish Spatial Expression Database

GENE ID: ENSDARG00000036012

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000036012 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000045748	stab2	4: 10721795 ~ 10763547 (+)
ENSDARG00000095068	si:dkey-10h3.3	7: 5739921 ~ 5754207 (-)
ENSDARG00000070065	si:ch211-163c2.2	7: 8040720 ~ 8052829 (-)
ENSDARG00000062485	dock11	7: 19179819 ~ 19332421 (-)
ENSDARG00000028401	rhogc	5: 36595149 ~ 36597636 (-)
ENSDARG00000078675	dock7	6: 32326074 ~ 32404633 (+)
ENSDARG00000013203	si:ch211-1f22.1	1: 56943492 ~ 56948694 (-)
ENSDARG00000096666	si:ch211-1f22.2	1: 56950797 ~ 56951369 (-)
ENSDARG00000096549	rac1l	1: 57128562 ~ 57129299 (-)
ENSDARG00000096576	si:ch211-286b5.6	1: 55279124 ~ 55287260 (+)
ENSDARG00000001733	gulp1a	9: 42546504 ~ 42650623 (+)
ENSDARG00000009023	ankrd28b	16: 20055878 ~ 20154859 (+)
ENSDARG00000028800	NA	16: 5612547 ~ 5636376 (+)
ENSDARG00000055400	si:dkey-56f14.7	16: 24626448 ~ 24646067 (+)
ENSDARG00000000370	triob	16: 8751815 ~ 8927425 (-)
ENSDARG00000030608	rhogd	14: 12169979 ~ 12176369 (+)
ENSDARG00000056525	bcar1	18: 22504200 ~ 22688073 (+)
ENSDARG00000074849	rac1a	12: 10464897 ~ 10476448 (-)
ENSDARG00000055635	crk	15: 24737599 ~ 24744920 (+)
ENSDARG00000068653	rhoga	15: 38201964 ~ 38218320 (-)
ENSDARG00000000588	grasp	23: 32199588 ~ 32236122 (-)
ENSDARG00000004301	rhogb	21: 30937690 ~ 30951909 (+)
ENSDARG00000028699	crkl	21: 18950575 ~ 18958079 (+)
ENSDARG00000063527	elmo2	11: 88247 ~ 103157 (-)
ENSDARG00000016551	iqsec1b	11: 26704181 ~ 27057572 (-)
ENSDARG00000017229	megf10	10: 16069987 ~ 16161040 (+)
ENSDARG00000071463	zgc:154125	24: 38534550 ~ 38545290 (+)
ENSDARG00000075100	neo1b	25: 2776511 ~ 3012872 (+)
ENSDARG00000042126	elmo3	25: 17423515 ~ 17471260 (+)
ENSDARG00000008937	NA	--
ENSDARG00000019258	NA	--
ENSDARG00000033733	NA	--
ENSDARG00000079559	NA	--
ENSDARG00000094613	NA	--
ENSDARG00000036012	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (shield, A to V)	embryo	baseline	shield stage, intact embryo, sectioned from animal to vegetal pole	GSM1448795	GSE59873
GSE59873 (shield, V to A)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole	GSM1448796	GSE59873
GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873
GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
GSE59873 (shield, R to L)	embryo	baseline	shield stage, intact embryo, sectioned from right to left	GSM1448799	GSE59873
GSE59873 (shield, V to D)	embryo	baseline	shield stage, intact embryo, sectioned from ventral to dorsal end	GSM1448800	GSE59873
GSE59873 (shield, D to V)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end	GSM1448801	GSE59873
GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, L to R)	embryo	baseline	15 somite stage, intact embryo, sectioned from left to right	GSM1448814	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE104057 (heart replicate2)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788519	GSE104057
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000036012

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.