Fish Spatial Expression Database

GENE ID: ENSDARG00000062957

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000062957 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000088181	mpped1	4: 8849816 ~ 8903240 (-)
ENSDARG00000069160	tafa5a	4: 27251865 ~ 27398414 (-)
ENSDARG00000019098	cd82a	7: 26709251 ~ 26739674 (+)
ENSDARG00000056722	cd99l2	7: 25878553 ~ 25895472 (-)
ENSDARG00000059747	kcnj19a	3: 38793499 ~ 38859305 (+)
ENSDARG00000057013	cadm3	2: 44049081 ~ 44183613 (-)
ENSDARG00000004580	nmnat2	2: 36026183 ~ 36040820 (-)
ENSDARG00000028878	vipr1a	2: 21229909 ~ 21300115 (+)
ENSDARG00000078582	myo16	9: 7909490 ~ 8133535 (+)
ENSDARG00000007886	slc35b2	20: 51237646 ~ 51267192 (-)
ENSDARG00000003181	sult1st4	8: 53171002 ~ 53179683 (-)
ENSDARG00000079079	sult1st7	8: 46447061 ~ 46457233 (-)
ENSDARG00000075565	lzts1	8: 39511932 ~ 39578792 (+)
ENSDARG00000094996	sult1st9	8: 46471875 ~ 46486009 (-)
ENSDARG00000028275	sult1st1	8: 46499098 ~ 46509194 (-)
ENSDARG00000041540	sult1st2	8: 46513743 ~ 46525092 (-)
ENSDARG00000007275	si:ch211-251b21.1	8: 47633438 ~ 47665026 (+)
ENSDARG00000040162	fgfbp3	17: 23298928 ~ 23302321 (+)
ENSDARG00000006636	slitrk2	14: 19258702 ~ 19261733 (+)
ENSDARG00000089055	ube2ka	14: 683947 ~ 689841 (-)
ENSDARG00000033170	sult2st1	12: 630295 ~ 645972 (-)
ENSDARG00000006811	sult1st6	12: 15197857 ~ 15205087 (-)
ENSDARG00000061304	ppp1r9a	19: 41075488 ~ 41160943 (+)
ENSDARG00000044541	ppp1r14ba	21: 26996276 ~ 27010837 (-)
ENSDARG00000086826	sult6b1	11: 43375326 ~ 43388063 (+)
ENSDARG00000057665	sprn2	10: 20635960 ~ 20637098 (-)
ENSDARG00000059058	vipr1b	24: 20708174 ~ 20808283 (-)
ENSDARG00000089255	kcnj11l	25: 7675629 ~ 7686269 (-)
ENSDARG00000062236	NA	--
ENSDARG00000062957	NA	--
ENSDARG00000080012	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

10 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
	GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, P to A)	embryo	baseline	15 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448811	GSE59873
GSE59873 (15 somite, V to D)	embryo	baseline	15 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448812	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head	GSM1448817	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

late embryo

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE104057 (heart replicate3)	heart	baseline	late embryo, 2dpf, isolated embryonic heart	GSM2788520	GSE104057
GSE128350 (1.67dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672145	GSE128350
GSE128350 (1.17dpf whole embryo replicate1)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672146	GSE128350
GSE128350 (1.17dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672147	GSE128350
GSE128350 (1.17dpf trunk)	embryo	baseline	late embryo, 1.17dpf, trunk, untreatment	GSM3672148	GSE128350
GSE128350 (1.67dpf trunk)	embryo	baseline	late embryo, 1.67dpf, trunk, untreatment	GSM3672149	GSE128350
GSE128350 (1.67dpf whole embryo replicate2)	embryo	baseline	late embryo, 1.67dpf, whole embryo, untreatment	GSM3672157	GSE128350
GSE128350 (1.17dpf whole embryo replicate3)	embryo	baseline	late embryo, 1.17dpf, whole embryo, untreatment	GSM3672158	GSE128350

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000062957

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.