G241992


Basic Information

Item Value
gene id G241992
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 175586 ~ 176623 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU274711
ATTCTCTTGCAAATGATTTGTGTTCCCCAGAGAAATTTTGCATTTGCTCGCAAAACCCTTGCGTTCCCCTGAGCAACTTTGCGGTTGATCTCAAAGAACACAAAACTTTTCGAGTGCAGTTTCTCTACATATACACACATACCCAGTACAATTTGAATAGTGGGTGTTGCTGTAACACACACAAACACACATGTTGGGTTTTCATGTTTTATGGGGACTTTATAAAACGGTTAGTTCCTGTCCTTGATTCTGATTGGTCAATAGCTGTGCTTTATTCACGATAAAACACGGCTATGTCCGCTTCACCCAACGGTTCTGTGTATCACTACACAACACCCTTAGACACCACTCTTAGCAATGTAAACTGTTTGTTCTCAATTGATATTGTTCATTGAAGCTTACTGTATTATGTAGAAGAGTATTGTGAGAAAGAGATCGAGTGAGCGAGTTTATTACCTGCATTCAGATTTAGCATTTTCCTTCAGGTCAGTCCTATGTTCATAATAAACAAATCTGTTTAAATGTCCGATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGTGCTAGTCAAAGCATTTGTCAGTTGCGTCTTGTTCAGTGTTCACAACAGTTCAGTCTTTTCCATGTAAAAGTCTTCACTACTGACTGACACACTCATAAAGACAGTCTTTGTCGCCATCTAATGGCATAATAAGGTAACTTCTGTTGCTGTTCACAGTCAGGGACTACTTTTTCCGGCAGAAGGAAGACATTTAGTAAAAGTTTACTTCATGAAAGTTGCATTGATACATATTTTTGGCTTTAATATTTGTATTGTGTGGTAACCGTTTTATAAAAGCAATAGTAGTGCTGTATCGTGAATAAGCCTCTCGTACCTTATTGCTTACTTAGATGATGATTTTTATACTGTACAAACTGTATATTCTGTCCCCTAACCCTAACTATCACAAAAAACTTTCTGCATTTTTACATTTTCAAAAAACATCACTTAGTATGATTTATAAGCTGTTTTTCTCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU274711 True 1038 lncRNA 0.37 1 175586 176623

Neighbor

gene id symbol gene type direction distance location
CI01000056_00069260_00074705 NA coding upstream 100876 68778 ~ 74710 (+)
CI01000056_00016906_00036156 SUCLG2 coding upstream 139074 16906 ~ 36512 (+)
CI01000056_00233785_00245058 NA coding downstream 56923 233546 ~ 245418 (+)
CI01000056_00256621_00277009 LRIG1 coding downstream 79824 256447 ~ 278395 (+)
CI01000056_00349501_00362980 RAB7A, RAB7 coding downstream 172878 349501 ~ 362980 (+)
CI01000056_00376962_00378136 ARPC4 coding downstream 200339 376962 ~ 378508 (+)
CI01000056_00601216_00610322 TBL1XR1.S, TBL1XR1A, TBL1XR1, TBL1XR1.L coding downstream 423730 600353 ~ 610405 (+)
G241962 NA non-coding upstream 60730 114585 ~ 114856 (+)
G241951 NA non-coding upstream 80449 94812 ~ 95137 (+)
G241949 NA non-coding upstream 98894 72004 ~ 76692 (+)
G242075 NA non-coding downstream 211124 387747 ~ 388159 (+)
G242090 NA non-coding downstream 237149 413772 ~ 414002 (+)
G242092 NA non-coding downstream 238854 415477 ~ 415676 (+)
G242095 NA non-coding downstream 242741 419364 ~ 420034 (+)
G242097 NA non-coding downstream 243857 420480 ~ 420736 (+)
G241982 NA other upstream 14636 155068 ~ 160950 (+)
CI01000056_01059066_01060580 NA other downstream 882266 1058889 ~ 1062844 (+)

Expression


Co-expression Network