G243017


Basic Information

Item Value
gene id G243017
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1992005 ~ 1992220 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU275817
AATTAAATCTGAATGTGAATGATGTCAGGTAAAGCAAGTAGCTGTGATTTAGAGATCATCACAGAACGATCACAATACTCAGCAGGTATATGGAGAGCACCTATTATGCAAAATTCACTTTTACATGCCCTTTGAACATAAATGTGTGTTGGCAGTGTGTGTACACAACCACCCTATAATGCTAAAAATTTACCCATTCCTCTTTTTTAAATTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU275817 True 216 lncRNA 0.36 1 1992005 1992220

Neighbor

gene id symbol gene type direction distance location
CI01000056_01963536_01972044 INPP1 coding upstream 19405 1963536 ~ 1972600 (+)
CI01000056_01926091_01928840 NA coding upstream 63049 1925515 ~ 1928956 (+)
CI01000056_01900971_01901584 HYLS1 coding upstream 90298 1900971 ~ 1901707 (+)
CI01000056_01873010_01874397 PTP4A1.L, TP4A1, PTP4A1.S, PTP4A1, PTP4A2 coding upstream 117253 1873010 ~ 1874752 (+)
CI01000056_01841169_01863442 MYOM2 coding upstream 128184 1841169 ~ 1863821 (+)
CI01000056_02009618_02014292 NABP2 coding downstream 17398 2009618 ~ 2014605 (+)
G242901 NA non-coding upstream 15594 1974787 ~ 1976411 (+)
G243010 NA non-coding upstream 36754 1954984 ~ 1955251 (+)
G242894 NA non-coding upstream 50619 1940456 ~ 1941386 (+)
G242946 NA non-coding upstream 306104 1679862 ~ 1685901 (+)
G243022 NA non-coding downstream 2930 1995150 ~ 1999442 (+)
G243043 NA non-coding downstream 69617 2061837 ~ 2065826 (+)
CI01000056_01059066_01060580 NA other upstream 929161 1058889 ~ 1062844 (+)
G241982 NA other upstream 1831055 155068 ~ 160950 (+)

Expression


Co-expression Network