CI01000056_01963536_01972044 (INPP1)


Basic Information

Item Value
gene id CI01000056_01963536_01972044
gene name INPP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000056
NCBI id null
chromosome length 2086016
location 1963536 ~ 1972600 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000056_01963536_01972044.mRNA
GTCTCCAGTATGGCAGAGTTGCTGCGGTTGCTCCTGAGTGTGGCAGAAAAAGCCGCCAATGTGGCACGCGTCTGTCGACAGGAAGCGCCGCTTTTTGAACTCCTGGTACAGGAAAAGACAGGAGCTGACAAAAACAAGAAATTCGTCCAGGACTTTAAGACACTTGCTGATGTGGTGATACAGGAAATGATTCGCCATGATGTTTGTGCCCAGGTTCTTAAAAATAAAGCTTTCAATGAAATCAGAAATAATTTCAGTCAAACCGAACTGACCGGCTTTATTCATGGAGAGGAGTCAAACAAGTTTGAGAATGGGCTTGGGGAGAGTGTTACTGTGACAGTCTGTGCTCAGGAAGAGGACACAACTGCTCTGTTGGCTAAAGTTCTGGATGGCGATCGAACGGCCGCGTCACTCCTGAGCAAGGCGATCCATCAGGACCTTCAGCTCAGAGATGAAACGGCTGAATCTCTACAGCTGTCAGTCAGCCCAGCTGATGTGGGCATCTGGATTGATCCCATTGATGGTACAAGTCAGTACATTGAAGGGAAAGAGGAAGAGGAGCCGGATGAAGGCTTTTGTCCTTCCGGACTCCCGTGTGCTCTGGTTCTGATTGGGGTTTACTTACGAGCCACTGGTCAACCAGTCATGGGTGTCATAAACCAGCCGTTCAACCGCAAAATCTCCGCGGGTAAAGGATGGAAAGGCCAGCACATCTGGGGTGTTTCCTATGGAGATGTGAATGTTTGCTCGTACACGCGGCGCAGGTCGTCGAATCCACAGAAGAGCGAGTGTTTGTCGGTGCTGCTGAGCTCCAGCGAGAGGCCCGCTGTCAAGGATGCGCTCGCGGCGCTTCCCAACAGCTCGCTGATGTATGCGTCCGGCGCGGGATACAAGATCCTGTGCGTGGTCCAGGGTCTGGTGGACGTATATGTGCTGTCAGAGGGCAGCACGTTCAAGTGGGACTCGTGCGCTCCTCATGCAGTGCTGCGGGCGCTGGGCGGCGGCGTCTCCGATCTAAGCGAGTGCATGCGCGCTCATCTCAATGGACACAAGGGACACACCACTGAACTCACCTACCACCAGCCCCACAACCACAGCCAAGGTGTGGAGAGATGGGCCAACCAAGGAGGAATCATCGCCTATTTGGACTCCAGCGTAATTGATAAAGTCGTGGCGGCACTTGCTGGAAAGATATGACAAAAATATTATGATACTCAAGTTATGCAAGTTTGTGTGTTTGTATTTTGTTTTTGCATATCTTATGTGCTTTATGATTCTAGTTTTATAAGATATAGTGACATATTCAAATATTAATTTAAAGCTGTAGCTTTTCAGGAGAAAAAAAAAATCTTAATACTTGTCTGCTAAGTTTTATTTTTTGGAAGAAGTTGGTTATATTTTCAAGAGAACAGGGAAAGGAAAGCAATCACTGTTTGCCTCATTACAGATGATATCACACATTTTACAGTTACTGCTGGTCACCTGAGACAAAAGAAAAAGCTAGAAACTGACAGTTCTCTGGGTTAGGATTATCATACGTAACACATGGACATTCATGCCCTTTTATGGTGATGCTTTTGACATATTTTTTCCCCCCCTTCATATTTCACTCTGAAAAAGACATAATGAGTGCAATGAGAGCTCTCACCGGAACAACATTTGGCTTGAATTGTACTTCATGGTCTCATTCTTAACCTTTACGGACATTTATGAACTTTTCAAACCTAAAATATTCTGCAAGAACTTGACCATA

Function

symbol description
inpp1 Predicted to enable inositol-1,4-bisphosphate 1-phosphatase activity. Predicted to be involved in inositol phosphate dephosphorylation. Predicted to be located in cytosol.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01107 INPP1; inositol polyphosphate 1-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000056_01963536_01972044.mRNA True 1753 mRNA 0.47 5 1963536 1972600

Neighbor

gene id symbol gene type direction distance location
CI01000056_01926091_01928840 NA coding upstream 34580 1925515 ~ 1928956 (+)
CI01000056_01900971_01901584 HYLS1 coding upstream 61829 1900971 ~ 1901707 (+)
CI01000056_01873010_01874397 PTP4A1.L, TP4A1, PTP4A1.S, PTP4A1, PTP4A2 coding upstream 88784 1873010 ~ 1874752 (+)
CI01000056_01841169_01863442 MYOM2 coding upstream 99715 1841169 ~ 1863821 (+)
CI01000056_01804273_01835065 LY75 coding upstream 127819 1804204 ~ 1835717 (+)
CI01000056_02009618_02014292 NABP2 coding downstream 37018 2009618 ~ 2014605 (+)
G243010 NA non-coding upstream 8285 1954984 ~ 1955251 (+)
G242894 NA non-coding upstream 22150 1940456 ~ 1941386 (+)
G242946 NA non-coding upstream 277635 1679862 ~ 1685901 (+)
G242970 NA non-coding upstream 289813 1673492 ~ 1673723 (+)
G242901 NA non-coding downstream 2187 1974787 ~ 1976411 (+)
G243017 NA non-coding downstream 19405 1992005 ~ 1992220 (+)
G243022 NA non-coding downstream 22550 1995150 ~ 1999442 (+)
G243043 NA non-coding downstream 89237 2061837 ~ 2065826 (+)
CI01000056_01059066_01060580 NA other upstream 900692 1058889 ~ 1062844 (+)
G241982 NA other upstream 1802586 155068 ~ 160950 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location