CI01000057_05857113_05861024 (ACOT8)


Basic Information

Item Value
gene id CI01000057_05857113_05861024
gene name ACOT8
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5856980 ~ 5862479 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05857113_05861024.mRNA
ATGCTCATTCAAGAGAACAGCGTTACAGTGATTTGTCAAAGGAACTACAGAACGATGAGCCTGTGGCGCCCTCTTGTGGAGACACTGATGAGAACAGTCTGATAATAGATCAGATCAGACTGAGTAAACAAGTTTGAGCTGATCAGCAGTCAGTGATTCTAAATTTTGTCTCGATCAACTAAAACACAACACACAAGGCAAAATACGGTGGGTTTTTAGAAAGCAAAAGTCAGACTGATGTTTTCTGATATTTAGAGATGCAAATGGTCTACAAAGAGTATGAAACAAATATAATTTATGTTTCGGTAAAAACGGAACTAATTTGCAAATGTTATGAACAGTGTTGGGGTAACGCATTACAAGTAACTTGAGTTGCGTAATCAGATTACTTTTTCAAGTAACTAGTTAAGTAACGCATTACTTTTTCAATTTGCAACAAAATATCTAAGTTACTTCTTCACATGTATTGACTGACAGCTCTCCTGTCCTCGTGTTAGGGTCAGAGGTGTTGTGTCTCTGTGTGAACATGATGTGTTTGTAGTTCTAGACTAATTGTGAACATGCATTTACTCATCTCACTCCACGAAAACATTCAGTGTTCCTCAGAATGATAAAAACAGTGAAATGCAATCTCAGAATTTTACGCAAACCTGTAATAATGAACTATATTAAATTACACTTTATTAACCAATGTCTTTGCTGCTGACCTTCTATGATCTAATTCAACCACATAATAAGCAAAAATGACTTAAGATTTAGAAATAAGAGTGTTGAACTTCCTTCTGTATCCTATTCTTCTTTAATCCAGAATAGCAGCACAGCTGAAAGGTTTGTCTGAGCAGCGCCCTCTACTGTACAGGCGTAAATATGCATCTCCTTCAGCCTGAGGCTTATTCATTTCACTTTTGGTATGAAAGGGCCTTAACATCTGCCAAAAACAGGAGCTTTTTGTTGTTATTAAAAACAAATAAGCAAGCCCAGCCCAGGTGAGAAAAAGTAACGCAAAAGTAATGTAACGCATTACTTTCAATAAAAAGTAACTAAGTAACTCATTGCGTTAATTAGTATCTTTTTTAGGGAGTAACGCAATATCGTAATGCATTACTTTTAAAAGTAACTTTTTCTCAACACTGGTTTTGAATCATTTTGAAATGCTTACGAGTCGTTTTATCTGCATTTGACCAGCAGATGTCCTCCATGTGCCGTTCAGTGAATCATGGTTTAATTGATTCAAAGATTCGGAACTAATGTCTCCCGTTACTAATGTAATAATTTTAATTTATATACACCAATACAACAACACGTAGCAATATTTACCAAAAAAATGACTACAACATTTGAAGCACGTCACGTGGGCAGTACTTCCGTGAACATTTTGACTGATGACGCAAATGAATCGTTGAAAGGGTTTTGAATCGATTCAGAAGATCCGCCCGCCACACAGATACAGTAAATATGGCTGAACGCGGCAGTGAATCTGGAGTTGACATTGTAGTAAATCAAGCGTCCAAATCAAGTGAAGCTGATCTCAGAAGTGTTCTGGTCACGAGTGTTCTGAATTTAGAGAAGCTCGACACCGACCTGTACAGAGGGACACATCACTGGGTTCCTCGCACCAAGCGCCTCTTCGGTGGTCAGATCGTTGGACAGGCTCTTGTAGCTGCGGCCAGTTCTGTCAGTGATCATCTCTACGCTCATTCACTGCACTGCTACTTCGTGAGAGCAGGGGACCCAAAGGTGCCAGTGCTGTACCAGGTGGAAAGGACTCGGGATGGCCGCAGTTTCTGTGTGCGATCTGTGAAAGCCATTCAGCACGGTCAGCCCATACTGATCTGCCAGGCGTCGTTTCACATGCAGCAGCCCAGTCCACTGGAGCATCAGTTCAACATGCCCACCGTCCCTCCGCCGGACACACTGCTCACGGTCGAGGAGCTCATTCAGCGCACCCTCAGTGATCCAAACCTGGCAGATAATACGCGACAGGGTCTAAATAAAATACTTGCTGATGAAGTTCCTATAGAGATCAAGCCAGTCAACCCGCCTGATTTCTACAGACGTGTTGCCATGGAACCGAAGACGTTATTCTGGGTGCGAGCGAGAGGGCATATAGGAGCTGGTAACATGAAGCTGCACTGTTGTGTGGCGGCGTACGTGTCGGATTATGCTTTCCTGGGGACGGCGCTGCTGCCGTACCCGAATCACAGGGCACAGTTCTCGGCCTCGCTGGATCACGCCATGTGGTTTCACAGCACGTTCAGAGCAGACGAGTGGATGCTGTACGAGTGTGAAAGCCCGTGGTCAGGAGGCAGCAGAGGCTTCGTCCAGGGCCGTCTGTGGAGACAGGATGGCGTTCTCGCAGCTTCCTGCGCCCAGGAGGGAGTGATACGAGTGAAGGCAGTTTCTCAGAGTAAATTATAGAGGATATACTCTTAAATAGAATAGAATTCTTAAGATGCCTTATGATAGTTGCCAGGCTGACTTTTTTGGTTTATAATTTGTCATATTACAACAATGTCAAGATTGCAGTTGGTCTGCAGAATATGGCAATAAA

Function

symbol description
acot8 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid catabolic process. Predicted to be active in peroxisomal matrix. Orthologous to human ACOT8 (acyl-CoA thioesterase 8).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K11992 ACOT8, PTE; acyl-CoA thioesterase 8

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05857113_05861024.mRNA True 2551 mRNA 0.43 6 5856980 5862479

Neighbor

gene id symbol gene type direction distance location
CI01000057_05849700_05856513 SRSF6 coding downstream 467 5849106 ~ 5856513 (-)
CI01000057_05842522_05847302 IFT52 coding downstream 9678 5842319 ~ 5847302 (-)
CI01000057_05830634_05838724 MYBL2, MYBL2B coding downstream 17933 5830058 ~ 5839047 (-)
CI01000057_05827116_05827514 NA coding downstream 29466 5827093 ~ 5827837 (-)
CI01000057_05633248_05635383 MKRN2OS.2 coding downstream 221082 5633215 ~ 5635898 (-)
CI01000057_05925181_05926068 NA coding upstream 62592 5923540 ~ 5927295 (-)
CI01000057_05955545_05960873 EDN3 coding upstream 93059 5955538 ~ 5961098 (-)
CI01000057_05989326_06003691 NA coding upstream 126290 5988769 ~ 6004299 (-)
G246981 NA non-coding downstream 136374 5719791 ~ 5720606 (-)
G246946 NA non-coding downstream 289690 5564522 ~ 5567290 (-)
G246857 NA non-coding downstream 558892 5297832 ~ 5298088 (-)
G246780 NA non-coding downstream 573363 5086312 ~ 5283617 (-)
G247041 NA non-coding upstream 306 5862785 ~ 5886376 (-)
G247058 NA non-coding upstream 24981 5887460 ~ 5890066 (-)
G247059 NA non-coding upstream 31786 5894265 ~ 5894570 (-)
G247060 NA non-coding upstream 32655 5895134 ~ 5895348 (-)
G247061 NA non-coding upstream 35863 5898342 ~ 5898933 (-)
CI01000057_04927533_04931127 CDK4 other downstream 925560 4927533 ~ 4931420 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 1959289 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 3935559 1904533 ~ 1921905 (-)
CI01000057_01801708_01806454 LHFPL5, LHFPL5A other downstream 4051827 1801528 ~ 1806454 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003123 acot8 coding NC_007122.7 CM002895.2 1512571 ~ 1520946 (+)