CI01000057_05989326_06003691


Basic Information

Item Value
gene id CI01000057_05989326_06003691
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5988769 ~ 6004299 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05989326_06003691.mRNA
AGTTTGTTTAAAAATGTGTCTTCACATTTTCATAAACGTGAAAATCTAGTCTAGGTAGGAGGTCCTTGATGTTATCGTTTTTCTAGAAATGAGTCATAACTTTACCACTGCTGTTTTTTGCTCATACTCCTCTGGTGCTTCTGCAATATGCAAATATTGACCATGTGTTCGCATTAAATATGAGATTCCTACTAGACTTAAAATCATAGCCATCTTAAATTATCTTCACATTTTTACATTTACATGATTAACTGATCAGAGAAAAAGACTATAGCTGTCAAATGTAAACATTCTATTGAATTGAGCAAATTCAACAAATTGTTTCTGCTGGCATACCATTTTCTTTTGAAGCCCAGAATAGCCAGCCTGCTCTGATACACATTTTGTAGCTTCTACCCACTCAGTACCCTTAAATGATGGTGATTTGTAATAAGGTGTGAAATCTTGGTTTCTTTAGCTTCCTATCACCTGAATTCTAATTTGAATAGGGGGAGGAATCCTTTGATCCAAAGTCCAGGCCTAATGAAAAAAATAATAATAATAACACTGTTTCTTTTTTTAGGTAATTAGTGAGCTCCATCTCCCAGCATCACAAGGGTTGTGTTACCATGGCAACTAGTAAGCAGAGCTTTGTGAGAGCTACCGAGCCTCAGTGTTCAGTGTCTGCACAGAGAGAGGAGGAGACGCATGTTAAGGCCCCTCTCACGACTATGTATGTCCACAACGTTCCTGCCCCTGGCCTGCAGCCATATCCTCAGGCCCAACCTGGAACCTTGCAGGATGCAACAGTTCTACCACTGTTCTTGCCAAGGATGTGTAGCAACTCGACTCTGCCCTCTCTGACACTGCATATTGCCAGCAGGGCTGCTTTGCAACAACAAAGGCTAATGGCTCCAGCAACCTCGGCCAGACCTAAGCCTATTGGGAAGCATATTTGCCCACACTGCGGCAAGGACTGTCTGAAGCCCAGCGTGCTTGAGAAACATCTCCGTTGCCACACAGGAGAGCGACCGTATCCCTGCACTACCTGTGGCATTTCCTTCAAGACGCAGAGTAACCTTTATAAACACAAGCGCACACAGGCTCATGCCCGCCTTTCCAGTGAATCTGACAAAGGCACCTTCAGCAGCCAGGAGAGCATGGAGAGTTCAAAGGACAACTGTACCAGTCTACCCTCTGAGAAGAATGACGGAGATTCAGTTGATATAAAGAGAAGCAAAGAGGTTCTTCCTGTAGTGTCAGTGACAATACCAGGTCAGGAAGACACCACAGATGCTAAGAGAGTGTCTGACATACAATTGGCATTACACAATGCTGCCATGGTTGGATTTAGCACAACTTCAGCACTTCAAGACAAGGTAAATTGTTTGAGAAAATCTGTGGAGTTATCAGTTGGCATGAAAAATAATCCTGCTATCCAACAGACAGGTGCACTGAGTGAGGATGGATGTACATCGTCGATTCCAAATCGTACACCGCTTCAGAGGCAGGAAGCTTTATTTTCCAAACCATGGGATTCCCCCATGTCCCGGGGAAAGTCTCAAAGCCATGACAGTACAGACTCAGGCTTCAGTGACAGCAGTGAGCATCACTCATCCAGCAGTCCTGGAGCAAGTTTGCATGATCCCACTATGGAAACATTTAAAGAAACCACTATGGAACGGCAAGAACCAGGTTCCTCCCAGACACCCTCAGAGATGACCCCTGAGGACACCAAAAGCAAGGTGTCCATTCAGGAGAAGCAGAAGCTGGAAGAACATATTTCAAAGCTTATATATGAGAATAGTGTGTTAGTGGACAATAAACAACTGGAAAATGTGCGTCCAAGAAAGACAGTACTGTCAAAACAAGGAAGCATTGATCTTCCTGTGCCGTACACTTATAAAGACTCCTTCCATTTTGAGATAAGGAGCAGCAAGCACATCTCAAGCTCTCAAAATCAAGACAAACGAGGTGGGGTAATTCACAGCTCTGTGCCTACACAACACTCCACTAGCATAGAGCATGCACCATTAACGCGAAGCAGTTCTTTACCTTTCACTATGGGTGGCAAACCCACTGATGGAGCAATGAATTTAAATCTTAGCAGAAGGTGCAGTGCAGGGCATGTTTACCCAATAAGATCATCAGACCAACAAGCACAAATTCATCGCTCACTAGTTAGGCAGGTAGCGGTAGATTGTTTGCCTACTGCAGAAGGATCCCCAGTTGAAAGAGGTAGTATGAGCAGCCTTAGCTCAGATGGAGACAGCACCGATTTTGGAACAGAGCCATGTATAAAAGGAAACTACAGGAGGAAAGCCCGGAAATTTGACTACACAAAATGGCACACTTACAAAGGTGGGACATTTAGGAAACTATACAATACTGAGAAAGACTGTCCACTGAAGATGAACAAGACTGCATCAAGCTCTGAACAAGCAGAGAGCCTGGAAACTCAAATTAGCCAACAGAGAGACGATGGATCTGTGTCTCTGAGCTTTACTTCCTGTTCTACTGTGACCTTACAAAATGACCTTAAAGTGTCATATACCAGCTTTGAAAATAATAACGTGATGGGGGCAGACATGGAAAGGGATAAATCAGCAACACAACACATTGACTGCCATATCCCATCAGAGAGGAAGAAACAGCGCACTGGAAATGATGTGCAAATGCAAATTTCAGATTCTAGAACTGGACAGGCAAATGGAAATCTGTGTGATTTAATGAGTCAATCACTTCTGTCAACTTGTGCAACACAGAGCTCCATCACAGTTCCAGCACAAAAGGTCAGCATGCAAAATCTTCACCCGCACGGTAGCTTCATACATCAGTTCTCAAATCCAAGTCACTTCCTTGGTAATACACTTAGTCCTGCTTTTTGTTTAATCAGTGTGACTGGGACATCTGGCACCCCGTCTGGTTCTATCAGCAGCCCTACTGTCCCTGAAGCCAAGACCAGCTTTCCTCCCAAGTACCAGCTGAAGATTCCGTGTTCCACAGATGGAGTGTCAGCTTCTTGTTCTGGTTCCACTTTAGCACATAGCACTTGTTCAACCATTCCAGCTCTTAGGGAAAGCTGCCAAACTACAGTGCAGTGCCATCTTGAGAACAGTGTATTATCCTCAAACCAGAGTCAGGGTGCTTCAATAGTCGCAACCTTTGACCAGAGTAAGCAAGATGTGTTGTGTGCGACAACTTCAACACCTATGTCATCGGTTTCCTGTTCAGGGCTGAATCAAACAAACTGTTTATCCAAAGCCCTGACACAACTTCAGTCTACCACTCCTACATCAATTTCACTCATTTCTCCTATGCTACTTCCACCAGTGCAGCATCAAGTGTCTTTGTTGCAGAGCAACGGTGCAACAGGTGCGGTGGAAAGCCAGTCACTAGTTCCTGTATCATCTGTATTGCATCAACCTCTTAAAGTTTTAACAAACTCAGAGAACACTCAGCCTGTCACATCAACGAACACAATGTCAACAGTGAGTTATTGTTCTGAATCTGGTCTACAAATCTATGCTTCAGTAACTACGACACCTACAGTTCAAAACCATCCTGCCTCCCCTGTGAGTGGACCAGGAAAACCTCTTGGTCTTACAGCGGACATCAAATCCACAGTGTATGAGAATACTCTAAACAGCACTGCCTCTAAAATTACCACAGGTGACTTTCAAGGGTCCCAGTCAGAAGGAAAAGTGATAGTACTAAATGGCTCAGCGCAGTCTCAGAATACGTTTTATGTACGAACAGCTGACCTCCAGATCGTCATGCAGCTCATTTCTGATGAACAGTTAGCACTGATAGAGCCTCATATTGAAACAACAACTTCAATCACTTTAACAAACCATACATCGCTTTCACAGGAGGTATATAGCAATGGTGTGACTAATGAGTGTACAGCACAGGAAATGGTAAATAATGGTGAGATGAGAAAAAAGAACACTTCCAATCATTGTGAATCTGCCAGTTCCATAAACAAAGCAGAAACTGTTTACAGTTTAAACTCTCAAATTGCTAAAAATTATGCAAATGGAAGCCCTCAGTGTGTTTCATCTTTGTCACATCCACAGACAAAGTTTCATATTACAGCTTCAGTGGATTACAATAAAAATTCAACTGGAGAATTGTATGAACCACAGAAGATACCTGAGAATTCCCAGGAGAGAAAATCTGCTGAGTTTGAGGTTACCCCAGGGTCACACCACAAACTAGTGGCTGGAGTTGAACCTCATTTAGTGGACAAGAACTATTCTAGACGAGAAAATGACAAAGAGCCCAAAAACTGTTCTGTCCATAACCCAGATTTGGTCAGCTCCCCTGAGGAACAAAAATTCACAGAGATAACCAGTCTAATGGAGCCAAATCACATTCAAACTATGCCAGTGGAGCCAGATGAAACAGACCTCATGTCAGTCACATTATCAGAAAATGGTGAGAGGGTTGAAACAATGACAACTACACAGCTCGGAACTTGTATTTGTAAGAAAAAGACCTCTAACGCAGAATCACAGCAGATGCAAAAAGTGATAAACTCCACAATACAACCCAGTCAGAACAAGCCATACAGGGCTGTATGTGGAAGCTCAAATTTAAATACAAGAGAAATGAGAGCATGTGACACAGGTAAACTCAGCTGCAAGCTTGGGACCCTGGCAACTGAAATGTGTGGTCCAGGACAAACACCTACACAGTATGAATCCCATCAGGCCTTTGCTCTTGGTCCAGTTGACTTTGTGAATGACACTTATAATCAAATAAAAGCATCATGCCCAATGGTGAACAGGACATCTAACATTCGTGACATTCTCGAGGACAGCACCAAATGTGGAGATGTGCATACACGCCATGCCAATCTGGAAATATTTACAGAGCCTGGGGGGAATGGTGCCCTCAATAGCTTGAGGTTTCACAGGGACCCTGGGACAAAGAGCAAGGAATCAATCCCCAAAGAACCTGAGAGTGGAGCTGGAGAAGGGGAGAGACCAAGCACAGAGGTGGCTGGCACGAACAACACACACAACCTCACATGCCAAGGCTGTGAAGACAATGGAAAACAAGACAAAAGAAAGGAAGAGGCAATGTCTTATGAAGAACATCAGACATCCGCTCAAGCTCACCAGGAGGTGTCCTTCAACATTTCAGAACCACTTCAGCATGAACAATTCAGAGATTCAAACAATCCAGATGCATCTGTTTGCACAAACATCCTTTCACAAACATGTCAACATGAAGGTCAAGGGGAATGTAACACCAACACCAGAAAAGACAGCATGGGTGAATATTTGGGGAACAGCTCTTCTCGAGAGACAATCCAACATGAGACATCCTCACTGACTGTGGCAAAAAATTCTAATCACACATCAGGACATCTTTTGGTACATCCACTCTCAGTGAATACCATGCAAAATGAATTCCAAAAGGAGATGCAGACAAGGGGTTCAATGAGCTATTGGATTTACTCAAAAAGCACCCAAGTTCAGATGCACTCGTCACAACACAAAACAAGTGGCACAACTGTATTAGCCAGCATTTCGCAAAATAACTGTGGTGCTTCAAAGATTGAAACCGCCAACACAAGTATTACTTCATCATCCAGTGCTGGGCCCAGTTCTTGCAATGCCTCAAATCAAATATCTAGTCAAGAACTGCAAATATGTCCCCCAGCCATACATAGCAACTCAACAGAGCCTAAACTGTTCTATTTAGGCAATAATAGTTACATGGAACATGAGGACAGTAACAGCAGCAGTGATGATGAGCAAAAACTAGTCATTGAACTTGAGTAAGGTGTAAGTACACACAGACAAGGCAAATCAACGCATTCTCACTTCCAAGGTGTCCAGTACTGCCACTTGTCCAAGAGCTCCATGCATAACTATACAGATGGCAAAAGAATCCTTTAGCAGCTTGCAATGCATGGTAATTTTGTCATGAAACTATCATTTTGTCATCACAACATATGTCAGATAAAAATTCAGTCACTATATCAATAATTTATTATATATAAATCAATAATTTATTCAGAAAATGGCAAATATTCTTATGCGTTTATTTTGTCTTCCTGTAGTCCAAACTGTAGGCCATGGATTTGATTCCCAAGGAAAGTGAGAACTGATCAAATGCATACATTGAATGCAGTGTAAATCACTTTGGATAAAAGCCAAATGCATAAATCATTTTTATGTTTTATATTGTGGAAAACTGGTTAGGTTTAGGGTAGATGTGTGGTTAGATGCTCAAAATGTCTATAATATAAATACTTTTCTAGATACAGGAACAACTGACTAAATGTGCAGAATTAAATGCATAATCAGTATATAATACATCTTTTTGTAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05989326_06003691.mRNA True 6331 mRNA 0.42 3 5988769 6004299

Neighbor

gene id symbol gene type direction distance location
CI01000057_05955545_05960873 EDN3 coding downstream 27671 5955538 ~ 5961098 (-)
CI01000057_05925181_05926068 NA coding downstream 61474 5923540 ~ 5927295 (-)
CI01000057_05857113_05861024 ACOT8 coding downstream 126290 5856980 ~ 5862479 (-)
CI01000057_05849700_05856513 SRSF6 coding downstream 132256 5849106 ~ 5856513 (-)
CI01000057_05842522_05847302 IFT52 coding downstream 141467 5842319 ~ 5847302 (-)
G247098 NA non-coding downstream 13186 5975292 ~ 5975583 (-)
G247093 NA non-coding downstream 19551 5968851 ~ 5969218 (-)
G247092 NA non-coding downstream 19971 5968588 ~ 5968798 (-)
G247079 NA non-coding downstream 20535 5967836 ~ 5968234 (-)
G247091 NA non-coding downstream 20986 5967477 ~ 5967783 (-)
G246780 NA other downstream 705152 5086312 ~ 5283617 (-)
CI01000057_04927533_04931127 CDK4 other downstream 1057349 4927533 ~ 4931420 (-)
CI01000057_03887278_03892054 ABHD8B, ABHD8 other downstream 2091078 3887203 ~ 3892054 (-)
CI01000057_01904867_01921400 NA other downstream 4067348 1904533 ~ 1921905 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location