CI01000058_04183820_04207647 (MAGI1B, MAGI1)


Basic Information

Item Value
gene id CI01000058_04183820_04207647
gene name MAGI1B, MAGI1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000058
NCBI id null
chromosome length 5213219
location 4183606 ~ 4207692 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000058_04183820_04207647.mRNA
ATAATTTATGCATGGCCTGTCATACCCAGCCTTTCTGATGGAGGCATGGGAGGGGGCAATGGCACATCAACGCATGTAGAAGTGGGAGGGAATCAGTGTTCGGAGGAGGGAGTACGATGGAACGAGAGAAGAAACAGAAAGAGAGACGGGGCTGCTGCCGCTCCACGCACCCTGATTGGAGTCATCCATCTGTCTTGGGATTGCTTTCAGATCTGTGCCTGTGGGGAAGGGGTGGCACCTGCGAAGAAGAGCCCCAAACTGCAACAGTTGGAGCGCAAGGACAGTCAGGGCAGCTCCCAGCACAGCGTGTCCAGTCAGCGCAGCATCCACACTGACTCTCCCCTCCACGCCTCCCAGGCTCTGCTCAACGAGTCGGCTGCCCCACCTCCCCCCTCTCAGCCCCTGCCAAGCCTGCCCCAGGACCCTCCAGTAGACGGAACTCTTCAGAAGAAACCAGATCCCTTTAAAATCTGGGCCCAGTCCAGGAGCATGTATGAAAGTAGGCAGAGCTGTGTTCGGATGAACCTGTCATCTGTACTTCCAAAGCTTTCATTAGCTTTTCTCATTCCTTCTTTCCTTCACTTTGCTTTCGCCTACTCGCTCACCGCCATACCTGATTACCAGGAGCAGGATATTTTCCTGTGGAGAAAAGATACCGGCTTTGGATTCAGGATCCTGGGAGGCAATGAACCTGGCGAGCCGATTTATATTGGCCACATTGTGAAATACGGAGCTGCCGATGAAGATGGGCGTCTGCGATCAGGAGATGAGCTAATTTGTGTGGATGGAACGGCTGTTGTGGGAAAATCCCATCAGCTAGTCGTTCAACTCATGCAACAAGCCGCAAAACAGGGTCACGTCAACCTGACTGTGAGACGCAAGACTGGATATGGATTGGCAAAGGTGGATGGTGAGATGCCTCCTTCTCCAGCCTCCTCTCACCACAGCAGCACACAGGCCCCGTCTCTAACCGAGGAGAAGCGCACGCCACAGGGCAGCCAGAACTCCCTCAACACGGTCAGCTCCGGGTCAGGCTCCACTAGCGGCATCGGCAGCGGAGGCGGAGGCGGCAGCAACAATACGGTGGTCCCCAATGCCATCCAACCCTACGATGTGGAGATCCAACGTGGAGAGAATGAAGGCTTCGGATTTGTTATTGTGTCGTCAGTGTCGAGACCTGAAGCGGGAACTACTTTCGCTGGAAACGCATGTGTGGCAATGCCTCATAAAATAGGTCGCATCATCGAGGGAAGCCCAGCTGACCGCTGCGGGAAACTAAAAGTTGGAGACCGGATCCTGGCTGTAAATGGCTGCTCCATCACCAATAAGTCCCACTCAGATATCGTCAACCTGATCAAAGAGGCTGGAAACACGGTGACGCTGCGGATCATTCCAGGAGACGGTCAGTTTCTCTCTCATTCTCTTTCCCTTCAGTCAACCAGCATAGCTGAGAAGAAAACATATTGGGAATGTGGGGCACCAAGTGAGCCAGAACTGACACTGGTTCCCCCTCAAAAACAGTCCTCCAATGCATCACTGCTGACCAACGCTGAGAAGATTGCAACCATAACTACCACACACACACCTCAACAGCAAACTGCACCTGAGCCAAGAAACAACACCAAACCAAAACAGGAGTCTTTTGAGTTCAAAGCCCCACAAGCTCCACCTCCTCCAGCTCCGACACAAACTTCAAATCAGGATGCTGAATTCTACTCTGTTGATCTGGAGAGGGACAATAAAGGCTTTGGTTTCAGCCTTCGAGGGGGTCGAGAGTACAACATGGACCTGTATGTGCTGAGACTAGCAGAGGACGGAGCAGCCGTGCGAAACGGAAAGATGAGGGTTGGAGATGAGATCCTGGAGATCAATGGGGAGAGCACCAAGGGCATGAAGCACGCCCGTGCCATTGAACTGATCAAAAACGGTGGCCGAAAAGTCCACCTGGTCCTAAGGAGGGGGGACGGCTCGGTGCCAGAATATGGTGGGTCAATCTACGAGAACATCCCCTTCTCCCCTGTCTTCACACCTTGAGGAGTTTCCCCCACGGGGGTCGACAACACCACCACCTCTTCTTTTCTGCGCACTGGTCCTCTCCTCTGACCTCCTCCCGGGTGATGGGCCTTCCTCTTGCTGCTGTTGCCCCCCCTTGCCTCGGTGCACTGGGCTAGCCTAGGGGACTATGGGATATGTGGCTTTTGGGTGGTGGTTGTGGCACATGCTTTTCGTAATACTTCACAAGAATAAA

Function

symbol description
magi1b Predicted to enable molecular adaptor activity. Predicted to be involved in signal transduction. Predicted to be located in bicellular tight junction and membrane. Predicted to be active in cell-cell junction and cytoplasm. Is expressed in blastoderm. Orthologous to human MAGI1 (membrane associated guanylate kinase, WW and PDZ domain containing 1).
magi1 Enables alpha-actinin binding activity. Involved in positive regulation of cell-cell adhesion. Located in several cellular components, including cell-cell junction; nuclear lumen; and plasma membrane.

GO:

id name namespace
GO:0005923 bicellular tight junction cellular_component

KEGG:

id description
K05631 AIP3, WWP3, BAIAP1; atrophin-1 interacting protein 3 (BAI1-associated protein 1)

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000058_04183820_04207647.mRNA True 2248 mRNA 0.54 14 4183606 4207692

Neighbor

gene id symbol gene type direction distance location
CI01000058_04178879_04179912 NA coding downstream 1809 4178287 ~ 4181797 (-)
CI01000058_04100253_04135812 ADAMTS9 coding downstream 47098 4099713 ~ 4136508 (-)
CI01000058_03977379_03991942 PRICKLE2, PRICKLE2B coding downstream 191664 3976864 ~ 3991942 (-)
CI01000058_03950901_03956376 PSMD6 coding downstream 227230 3950901 ~ 3956376 (-)
CI01000058_03904018_03906800 THOC7 coding downstream 275498 3903897 ~ 3908108 (-)
CI01000058_04211165_04255297 NA coding upstream 3187 4210879 ~ 4255536 (-)
CI01000058_04276892_04277098 NA coding upstream 68909 4276601 ~ 4277545 (-)
CI01000058_04321968_04325974 NA coding upstream 112789 4320481 ~ 4326404 (-)
CI01000058_04412049_04428358 NCOA3 coding upstream 204041 4411733 ~ 4429252 (-)
CI01000058_04462468_04465591 NA coding upstream 254659 4462351 ~ 4466016 (-)
G250395 NA non-coding downstream 15480 4167812 ~ 4168126 (-)
G250223 NA non-coding downstream 285044 3852442 ~ 3898562 (-)
G250238 NA non-coding downstream 304055 3794644 ~ 3879551 (-)
G250326 NA non-coding upstream 100465 4308157 ~ 4310100 (-)
G250409 NA non-coding upstream 129168 4336860 ~ 4337089 (-)
G250410 NA non-coding upstream 134818 4342510 ~ 4342853 (-)
G250308 NA non-coding upstream 139037 4346729 ~ 4348920 (-)
G250299 NA non-coding upstream 200162 4407854 ~ 4408916 (-)
G250230 NA other downstream 486895 3688643 ~ 3696711 (-)
CI01000058_02859435_02860658 FAM72A other downstream 1322413 2858483 ~ 2861491 (-)
G247592 NA other downstream 3528657 646443 ~ 654949 (-)

Expression


Co-expression Network