G251296


Basic Information

Item Value
gene id G251296
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 1672545 ~ 1673709 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU285242
ATCAGATATATGAGTGTTTTCTTTGTTTAAGGAGGGAAGGAGCAATAGAAAGAGAGTGGAAACAAACAGAGTAAGAGATCTTACAACAGTCAATCAAAAGAATTCATGAGCTTCTTCAACACTATTGTTAATGAGACCAATGGTCACAAAAATCTTGGTTTATATAGATAAACCAAGATATTATGACAGAATGTATCTTGAATATAAGTGCGGAATTCCTTGTACGGGCACTTCTCCCGGAAGAGCGCGCGCGCACATGTTGATCAGAGCGAGAAAGCACGCCCATCAAAGCGCGTTCGGCATTACGGAAGTCGTCGGCAGCGCTGCACAGGTCACAGGACTTCACGAAATCTACAATGTCACCAAAGAAGTGTGTTTTTGGTTGTGAGGGAAAGATAACCTTGCTTCCCAAAGAACCCAGCGTTAAGTGGAGCTCAGAGTTTTGTGCTCACGCATTACATTGATGCGCTCTCGATATTTGTTATTAAAATAACCATAGAAACTGATAGTTGCAATCACTTTTTTATTGGTTAAAATGAATGGAGAATATCTCGTGTTTTTCCGTGGCTGCTCGACCCTCTGGATCAGCGCTTATAGTTTCATAAACAAGGCCCAGTTCTACCCTGGATTTACAGATCATTTGAAACTGAAAGATGGAGCGGTCACAGCGATAATGATCCCGGTCATGAGTCGGAACCGCAGGTGGTGAGTAAAACTGCTTCAAATGTCTGTTTTGTTGGCAATAGGCACCTAAGTGCATATAATGTAAACAACACGAACATAGTGAATTCATAAATTCATTATTCATCATTCATTATACGCTATATTCATTATAGTGAGTCAAAAGTTATCCATGGACAATGCGATGGTGTACTGTGTGTGTTTAAATACATATGTTTAGCTGACCATTGATAGCTTGCAGACGATCGCTACGCAAAAGCTGCGCGTGCTCGTCACTCTTTAGCTCCGCTCACACGGCACGCCTCCAGGCGCTCGGCTGTTTTCGGAAAGACTCGGTACAGCGTATGTATCTTTTATAAATATGATAAAACTAAAGACTTTTTGGAGATATGAAGGATGCACTACTATTCTATAGGTACTCAAGATTAACATGAGATTGGCAGAAACTGTGTGTGATACCCCCCCTTTAACTTTACGATTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285242 True 1165 lncRNA 0.41 1 1672545 1673709

Neighbor

gene id symbol gene type direction distance location
CI01000059_01443666_01454016 AATF coding upstream 218529 1443666 ~ 1454016 (+)
CI01000059_01437393_01441869 LHX1B, LHX1 coding upstream 229264 1436230 ~ 1443281 (+)
CI01000059_01351954_01355411 MRM1 coding upstream 316659 1351954 ~ 1355886 (+)
CI01000059_01293199_01294944 FZD9B, FZD9 coding upstream 377246 1292871 ~ 1295299 (+)
CI01000059_01257411_01265603 NA coding upstream 406260 1256593 ~ 1266285 (+)
CI01000059_01831592_01831849 NA coding downstream 157183 1830892 ~ 1833594 (+)
CI01000059_01893067_01914170 NA coding downstream 219358 1893067 ~ 1914246 (+)
CI01000059_01985427_01999889 PJA2 coding downstream 311718 1985427 ~ 1999938 (+)
CI01000059_02068570_02070710 NA coding downstream 394861 2068544 ~ 2071924 (+)
CI01000059_02087382_02094472 SLC31A1 coding downstream 413626 2087335 ~ 2095736 (+)
G251289 NA non-coding upstream 4833 1667449 ~ 1667712 (+)
G251247 NA non-coding upstream 50489 1619652 ~ 1622056 (+)
G251277 NA non-coding upstream 56287 1616028 ~ 1616258 (+)
G251251 NA non-coding upstream 106414 1565813 ~ 1566131 (+)
G251245 NA non-coding upstream 110427 1561776 ~ 1562118 (+)
G251774 NA non-coding downstream 9658 1683367 ~ 1683604 (+)
G251788 NA non-coding downstream 27152 1700861 ~ 1701302 (+)
G251830 NA non-coding downstream 93958 1767667 ~ 1767900 (+)
G251836 NA non-coding downstream 104350 1778059 ~ 1778296 (+)
G251931 NA non-coding downstream 206699 1880408 ~ 1882713 (+)
G251249 NA other upstream 11155 1627766 ~ 1661390 (+)
G251017 NA other upstream 605188 1056252 ~ 1067357 (+)
G251046 NA other upstream 693327 978741 ~ 979218 (+)
CI01000059_02133197_02134625 NA other downstream 457783 2133003 ~ 2135347 (+)
G252732 NA other downstream 1529030 3202739 ~ 3203091 (+)
G253654 NA other downstream 3564050 5237759 ~ 5238233 (+)
G254692 NA other downstream 4586334 6260043 ~ 6261633 (+)

Expression


Co-expression Network