G251836


Basic Information

Item Value
gene id G251836
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000059
NCBI id null
chromosome length 10376574
location 1778059 ~ 1778296 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU285870
TGGAGCGCGTCTTAAATGAACCGAAACTCAGCGTATAGGCTGCTTGCCTCACAGACGTGAGAAATATATCTATAGAAACTTTAAATGTCTACTTTTAAACGTAATAATTCAAAACGAAAAGAAATAGGCTACTCTCTGATGATCATCCGACTGAAATGTGCATTCTTTCTCTAGGCGCGTCCACGGAGATAATGAGAGTCAGCAATGCAACCGACACTGAGAAATAACTAGTTTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU285870 True 238 lncRNA 0.39 1 1778059 1778296

Neighbor

gene id symbol gene type direction distance location
CI01000059_01443666_01454016 AATF coding upstream 324043 1443666 ~ 1454016 (+)
CI01000059_01437393_01441869 LHX1B, LHX1 coding upstream 334778 1436230 ~ 1443281 (+)
CI01000059_01351954_01355411 MRM1 coding upstream 422173 1351954 ~ 1355886 (+)
CI01000059_01293199_01294944 FZD9B, FZD9 coding upstream 482760 1292871 ~ 1295299 (+)
CI01000059_01257411_01265603 NA coding upstream 511774 1256593 ~ 1266285 (+)
CI01000059_01831592_01831849 NA coding downstream 52596 1830892 ~ 1833594 (+)
CI01000059_01893067_01914170 NA coding downstream 114771 1893067 ~ 1914246 (+)
CI01000059_01985427_01999889 PJA2 coding downstream 207131 1985427 ~ 1999938 (+)
CI01000059_02068570_02070710 NA coding downstream 290274 2068544 ~ 2071924 (+)
CI01000059_02087382_02094472 SLC31A1 coding downstream 309039 2087335 ~ 2095736 (+)
G251830 NA non-coding upstream 10159 1767667 ~ 1767900 (+)
G251788 NA non-coding upstream 76757 1700861 ~ 1701302 (+)
G251774 NA non-coding upstream 94455 1683367 ~ 1683604 (+)
G251296 NA non-coding upstream 104350 1672545 ~ 1673709 (+)
G251289 NA non-coding upstream 110347 1667449 ~ 1667712 (+)
G251931 NA non-coding downstream 102112 1880408 ~ 1882713 (+)
G251999 NA non-coding downstream 128136 1906432 ~ 1907029 (+)
G251939 NA non-coding downstream 135965 1914261 ~ 1917485 (+)
G251941 NA non-coding downstream 230242 2008538 ~ 2010679 (+)
G252058 NA non-coding downstream 279564 2057860 ~ 2058137 (+)
G251249 NA other upstream 116669 1627766 ~ 1661390 (+)
G251017 NA other upstream 710702 1056252 ~ 1067357 (+)
G251046 NA other upstream 798841 978741 ~ 979218 (+)
CI01000059_02133197_02134625 NA other downstream 353196 2133003 ~ 2135347 (+)
G252732 NA other downstream 1424443 3202739 ~ 3203091 (+)
G253654 NA other downstream 3459463 5237759 ~ 5238233 (+)
G254692 NA other downstream 4481747 6260043 ~ 6261633 (+)

Expression


Co-expression Network